KEGG T06165: EUB48

Rhodoferax sediminis CHu59-6-5: EUB48_05610

Entry

EUB48_05610       CDS       T06165

Name

(GenBank) RsmB/NOP family class I SAM-dependent RNA methyltransferase

K03500

16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]

Organism

rhf Rhodoferax sediminis CHu59-6-5

Brite

KEGG Orthology (KO) [BR:rhf00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:rhf03009]
    EUB48_05610
Enzymes [BR:rhf01000]
2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.176  16S rRNA (cytosine967-C5)-methyltransferase
     EUB48_05610
Ribosome biogenesis [BR:rhf03009]
Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    EUB48_05610

SSDB

Motif

Pfam:

Methyltr_RsmB-F Methyltransf_31 Ubie_methyltran MTS Methyltr_RsmF_N Methyltransf_25 Cons_hypoth95 Methyltransf_23 GCD14 Met_10

Other DBs

NCBI-ProteinID:

QDL39649

UniProt:

A0A515DGX7

Position

1163109..1164380

AA seq 423 aa
MHPKALLDACSELVRLTLKFDHPADSIVSRFFRDHKEFGPRERATLAETVYTVLRKKLLF
DHFAPSGSGPKERRLAILGFYGPRDFLKSALSDQEKNWLDQCDQINVADLMERHRHNLPE
WLVQPLREQLGDEFWPLVDSLNKSAGLDLRVNALSDKRPEVQKELAKAGIKSVATPYSPW
GLRLDSKPALTKVEAFARGAIEVQDEGSQLLALLLDAKRGEMVVDFCAGAGGKTLAIGAC
MRNTGRLYAFDTSAHRLDALKPRLARSGLSNVHPAAIAHERDERIKRLAGKIDRVLVDAP
CSGLGTLRRNPDLKWRQSPQSVAELVVKQTAILQSAARLLKPGGRLVYATCSVLPQENEA
IAQAFTAANSEFTPLDVGELLSNLKIENAMSLCSGPVKGTEYLRLWPHRHGTDGFFAAVW
VKN

NT seq 1272 nt +upstreamnt +downstreamnt
atgcatcctaaagccctgcttgacgcctgctctgaactcgtcagactgaccctcaagttc
gatcacccggccgactccatcgtgtcgcgctttttccgcgaccacaaggagtttggcccg
cgcgagcgcgccacgctggccgagacggtctataccgtgctgcgcaagaagctgctgttc
gaccacttcgcgccctcgggcagcggtcccaaggagcgccggctggcgattctgggtttc
tacggcccgcgcgattttctcaagagcgccttgagcgaccaggagaaaaactggctcgac
cagtgcgaccagatcaatgtggctgacttgatggagcggcaccgtcacaacctgcccgag
tggctggtgcagccgctgcgcgagcagctgggggacgagttctggccgctggtcgacagc
ctgaacaaaagcgcggggctcgatttgcgcgtcaacgccttgagcgacaagcgccccgaa
gtgcaaaaggagctggccaaggctggcatcaagtcggtcgccacgccgtactcgccctgg
ggcctgcggctggacagcaagcccgcgctgaccaaggtggaggcctttgcgcgcggcgcg
atcgaggtgcaggacgaaggctcgcagttgctggcgctgttgctggacgccaagcgcggc
gaaatggtggtggatttttgcgccggcgcgggcggcaagacgctggccattggcgcgtgc
atgcgtaacaccgggcggctgtatgcgttcgacacctcggcgcaccggctcgatgcgctc
aaaccgcggctggcgcgcagcgggctgtccaacgtgcacccggcggccatcgcgcacgag
cgcgacgagcgcatcaagcgcctggccggcaagatcgaccgcgtgctggtcgatgcgccg
tgctcaggcctgggcacgctgcgccgcaatccggacctcaaatggcgacaatcgccccag
tcggtggccgaactcgtggtcaagcagacggcgatcctgcaaagtgccgcccggctgctc
aagcctggcggacggctggtgtacgccacctgcagcgtgctgccgcaggaaaacgaggcg
attgcccaggcgtttaccgccgcaaatagtgagttcaccccactcgacgtgggggaactc
ctgtccaatctaaagatcgaaaacgccatgagtctatgcagtggtcctgtcaaaggtacc
gaatacctgcggctgtggccgcatcggcatggaacagacggcttctttgccgccgtttgg
gtgaaaaattaa

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (18)   

Download RDF

DBGET integrated database retrieval system