KEGG   Rhodoferax sediminis CHu59-6-5: EUB48_17395
Entry
EUB48_17395       CDS       T06165                                 
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
  KO
K04567  lysyl-tRNA synthetase, class II [EC:6.1.1.6]
Organism
rhf  Rhodoferax sediminis CHu59-6-5
Pathway
rhf00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:rhf00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    EUB48_17395 (lysS)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:rhf01007]
    EUB48_17395 (lysS)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:rhf03016]
    EUB48_17395 (lysS)
Enzymes [BR:rhf01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.6  lysine---tRNA ligase
     EUB48_17395 (lysS)
Amino acid related enzymes [BR:rhf01007]
 Aminoacyl-tRNA synthetase
  Class II (A)
   EUB48_17395 (lysS)
Transfer RNA biogenesis [BR:rhf03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    EUB48_17395 (lysS)
 Prokaryotic type
   Other AARSs
    EUB48_17395 (lysS)
SSDB
Motif
Pfam: tRNA-synt_2 tRNA_anti-codon tRNA-synt_2d TUG-UBL1
Other DBs
NCBI-ProteinID: QDL38864
UniProt: A0A515DEM4
Position
3608063..3609601
AA seq 512 aa
MSDHKNHSAPVAAPDENLLILERREKLKAIRQRQREGKGVAFPNDFKPTDHAATLFTAHD
GKSTEELAALGIPAKIAGRMMLKRVMGKASFATLQDGSGRIQIYVTRDAVGEELYTRFKH
WDLGDIVAAEGQVFKTKTGELSIHASNVRLLTKSLRPMPDKFHGMADQETKYRQRYVDLM
TDESARERFKARSRAVSAIRDFMVENDFLEVETPMLHPIPGGANAKPFKTHHNALDQEMF
LRIAPELYLKRLIVGGFERVFEINRSYRNEGISVRHNPEFTMMEFYAAYWNYLDLMSFTE
AIIRNVAQKTLGTLQLQYGGKPVDLSQPFERLTIVEAILKHTDAGAHVDDAAWLTNALKK
LGLSEGKNKLSSRSLPSLQVLYFEETVEEKLWQPTFIMEHPTEISPLARANDERPEVTER
FELYITGREFGNGFSELNDAEDQAARFQAQVAAKDGGDDEAMFYDHDFVRALEYGMPPTG
GCGIGIDRLMMLLTDSPSIRDVILFPALRRES
NT seq 1539 nt   +upstreamnt  +downstreamnt
atgtctgaccacaaaaaccattcggcgcccgtcgccgcgcccgacgaaaacctgctgatc
ctggagcgccgcgaaaaactcaaggccatccgccagcgtcagcgcgagggcaagggcgtc
gccttccccaatgacttcaagccgaccgaccatgctgccacgctgtttaccgcgcacgat
gggaaaagcaccgaagagctggcagcactgggcatccccgccaagatcgccgggcgcatg
atgctcaagcgcgtgatgggcaaggccagctttgcgacgctgcaggacggcagcgggcgc
atccagatctacgtcacgcgcgatgccgtcggcgaagagctgtacacccgcttcaagcat
tgggatctgggcgacatcgtggccgccgagggccaggtcttcaagaccaagaccggcgag
ctatcgatccacgccagcaacgtgcgcctgctcaccaagagcctgcgccccatgcccgac
aagttccacggcatggccgaccaggaaaccaagtaccgccagcgctatgtggacctgatg
accgacgagtcggcgcgcgagcgcttcaaggcacgcagccgcgccgtcagcgcgatccgc
gactttatggtggagaacgattttctggaggtcgagacgcccatgctgcaccccattccc
gggggcgccaacgccaaaccgttcaagacgcaccacaacgcgctggatcaggaaatgttc
ctgcgcatcgcgcccgagctgtacctcaagcgcctgatcgtgggcggcttcgagcgcgtg
ttcgagatcaaccgcagctaccgcaacgaaggcatctcggtgcgccacaaccccgagttc
accatgatggagttctacgctgcgtactggaactacctggatctgatgagttttaccgaa
gccatcatccgcaatgtggcgcagaagaccctgggcacgctgcagctccagtacggcggc
aaaccggtggatctgtcgcagccgttcgagcggctgaccatcgtcgaagccattctcaaa
cacaccgacgccggcgcccatgtggacgacgccgcctggctgaccaatgcgctcaaaaag
ctgggcctgtcggaggggaaaaacaaactatcgagccgctcgctgcccagcctgcaggtg
ctgtacttcgaagagaccgtggaagaaaagctctggcagccgaccttcatcatggagcac
ccgaccgagatttcaccgctggcgcgcgccaacgacgaacgtcctgaagtcaccgagcgc
ttcgagctctacatcaccgggcgcgaattcggcaatggcttttccgagctcaacgacgcc
gaggaccaggcggcgcgcttccaggcgcaggtggcggccaaggacggcggcgacgacgaa
gccatgttctacgaccacgacttcgtgcgcgccctcgaatacggcatgccgcccacgggc
ggctgcggcatcggcatcgaccgcctgatgatgctgctgaccgacagccccagcatccgc
gacgtgattttattcccggccttgcgacgggaatcctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (21)   

Download RDF
DBGET integrated database retrieval system