KEGG   Rhodoferax sediminis CHu59-6-5: EUB48_18475
Entry
EUB48_18475       CDS       T06165                                 
Name
(GenBank) RNA-binding protein
  KO
K06182  23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
Organism
rhf  Rhodoferax sediminis CHu59-6-5
Brite
KEGG Orthology (KO) [BR:rhf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:rhf03009]
    EUB48_18475
Enzymes [BR:rhf01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.21  23S rRNA pseudouridine2604 synthase
     EUB48_18475
Ribosome biogenesis [BR:rhf03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    EUB48_18475
SSDB
Motif
Pfam: S4 PseudoU_synth_2
Other DBs
NCBI-ProteinID: QDL39059
UniProt: A0A515DFA4
Position
3840610..3841404
AA seq 264 aa
MAESDRPEPAQGMRLAKRVAELKACSRREAEQYIEGGWVTVDGQVVEEPQFRVLAAHRIE
IDAHASLLALTPVTLLLHKPPGYDAGTGVPVDIKGVGKGVRPALALITPASHAADDRSGI
RLLKKHSAQQTLGMPLESAASGLVVFTQDWRTLRKLTEDAAFIEQEFTVEVAGEVAPGLL
ERLNHGLHTDGRPLPPVKVSVGSTGEGATRLRFAVKGAHPGLIALLCERVGLRITAMKRI
RIGRVPLAALAPGQWRYLLPHEQF
NT seq 795 nt   +upstreamnt  +downstreamnt
atggccgaatccgaccgtcccgagcccgcgcagggcatgcgcctggccaagcgcgtggcc
gaactcaaggcctgctcgcggcgcgaggccgagcagtacatcgagggcggctgggtcacg
gtcgatggccaggtggtggaagagcctcagttccgcgtcctggcggcgcaccgcatcgag
attgacgcgcacgcgagcctgctggcgctcacgccggtcacgctgctgctgcacaagccg
cccggctatgacgcgggcaccggcgtgccggtggacatcaagggcgtcggcaagggcgtg
cggcccgcgctcgcgctgatcacgccggcctcgcacgcggcagacgaccgcagtggcatc
cgcctgctcaagaagcattccgcgcagcagaccctgggcatgccgctggagagcgccgcc
agcggcctggtggtgttcacgcaggactggcgcaccctgcgcaagctgaccgaggacgcc
gccttcatcgagcaggagttcacggtggaggtcgcgggcgaggtcgcacctggcttgctc
gagcgcctcaaccacggcctgcacacggacggacgcccgctgccgccggtcaaggtcagc
gtgggcagtaccggcgagggtgccacgcggctgcgctttgccgtcaagggcgcgcacccg
gggctgattgcgcttttgtgcgagcgcgtcgggctgagaatcaccgcgatgaagcgcatc
cgcatcggccgcgtgccgctggccgcgctggcgccgggacagtggcgctacctgctgccg
cacgagcagttctga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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