KEGG   Rhodoferax sediminis CHu59-6-5: EUB48_19235
Entry
EUB48_19235       CDS       T06165                                 
Name
(GenBank) rRNA pseudouridine synthase
  KO
K06182  23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
Organism
rhf  Rhodoferax sediminis CHu59-6-5
Brite
KEGG Orthology (KO) [BR:rhf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:rhf03009]
    EUB48_19235
Enzymes [BR:rhf01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.21  23S rRNA pseudouridine2604 synthase
     EUB48_19235
Ribosome biogenesis [BR:rhf03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    EUB48_19235
SSDB
Motif
Pfam: PseudoU_synth_2 S4
Other DBs
NCBI-ProteinID: QDL39204
UniProt: A0A515DFK6
Position
complement(3997881..3998744)
AA seq 287 aa
MTDSKPPPAFRRAPPPGNKPPPLNATGPGVRVAASGATTTRLNKRMAELGLCSRREADDW
IDKGWVKVNGEIAPMGLQVKHSDRIEIDKKAQGHQATQVTILLNKPMGYVSGQAEDGHQP
AVTLVTAQNRWPDDNARFFFHPSQLRGLAPAGRLDIDSIGLLVLTQDGRVARQLIGEDSV
MDKEYLVRVSLGETVTNVQAAFPAEQLARLRYGLSLDGQLLKPAQVEWQNPEQLRFVLTE
GKKRQIRRMCEQVGLKVVGLKRVRIGRVVLGHLPVGQWRYLAPHERF
NT seq 864 nt   +upstreamnt  +downstreamnt
atgaccgattccaaaccccctcccgcgttccgccgtgcgccgccccccggcaacaagccg
ccgccgctgaacgccaccggcccgggcgtgcgcgtggcggcgtctggcgccaccacgacc
cggttgaacaagcgcatggccgagctcggcctgtgttcgcgccgcgaggccgacgactgg
atcgacaagggctgggtcaaggtcaacggcgagatcgcgcccatgggcctgcaggtcaaa
cacagcgaccgcatcgagatcgacaaaaaggcccagggccaccaggccacgcaggtcacc
atcctgctcaacaagcccatgggctatgtcagtggccaggccgaagacgggcatcagccg
gcggtgaccctggtgaccgcgcagaaccgctggccggacgacaacgcgcgcttcttcttc
catccctcgcagttgcgcggcctggcaccggcggggcggctcgacatcgactcgatcggc
ctgctggtgctgacgcaggacggccgcgtggcgcgccagctgatcggcgaggactcggtg
atggacaaggaatacctggtgcgcgtcagcctgggcgagaccgtcaccaatgtgcaggcc
gcgttccccgccgaacagctggcgcgcctgcgctacggcctgagtctggacggccagctc
ctcaagccggcgcaggtcgagtggcagaaccccgagcagctgcgttttgtgctgacggag
ggcaaaaaacgccagatccggcgcatgtgcgagcaggtcggcctcaaggtggtaggcctc
aagcgcgtccgcatcgggcgcgtggtgctcggccatctgccggtcggacagtggcgttac
ctggcgccgcacgagcggttctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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