KEGG   Rhodoferax sediminis CHu59-6-5: EUB48_19915
Entry
EUB48_19915       CDS       T06165                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
rhf  Rhodoferax sediminis CHu59-6-5
Brite
KEGG Orthology (KO) [BR:rhf00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:rhf02048]
    EUB48_19915
Enzymes [BR:rhf01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     EUB48_19915
Prokaryotic defense system [BR:rhf02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   EUB48_19915
SSDB
Motif
Pfam: ResIII SWI2_SNF2 DEAD HSDR_N EcoEI_R_C Helicase_C HSDR_N_2 UvrD-helicase AAA_34
Other DBs
NCBI-ProteinID: QDL39330
UniProt: A0A515DFZ3
Position
complement(4140465..4142756)
AA seq 763 aa
MARNERLTCKELIEPRLAALGWAWQEQLRIGPGRVNLTGDTMYDETQSIIADYLLRCRGV
PLAIVEAKSESESAADGMQQASRYARRLSLRFSIASNGDDWILTDNETGAFESLSAPPSP
DELVARMGVSVDWSRWEGAFAAGYHMDQVSRRGVRPYQDIAINKALWQFAQGDDRVLLLM
ATGTGKTFTIFQLIWKLLNGKALKREHVLFLTDRNSLKDQAYRAFSAFTASERVQIDKDT
VAQGQHLVGKVFFANYQSLDEELEGKKVYEHYDPDFFDLVVIDECHRSGFGDWFGVLKHF
GGALQLGLTATPRELEDGDRSLTAEEKRRDTQHYFGDPVFIYSLKQAIEDGFLVPYLLEE
RITNVDEDGYTGPDGKRYTTANFERDIRMPDRTKAIAEDLWEVLGKYELRDEKTIIFCVD
DTHAAFMAQELRRLSGSADYAARITRAERNSHQLERNFAVVGPSNPRVAVTVDLLTTGFD
APDVKNVVFVRPLRSAILYKQMKGRGTRLCEDIDKRYFTIFDYSGASQLEDAEFDGHPAN
RQKGYEQKRTKPSKAAEPSAKYLAQGVRVVISAENRYVCLADGRKVPFEEYTQQSREFIL
DVSHKGLDELLRIWIDKGGRQELREALRDRDIYPAAFRHYLDLPDADDVDILAKIGFQLP
RVPNRADRANRLWDQDQIWLLDHLGETAQPESQRFKTHVWQTALDHYRLFGIDDLEQART
YGAPQFAEQFGSFTTLTQRYGGPALLKTDLELVKQHLYVAMAA
NT seq 2292 nt   +upstreamnt  +downstreamnt
atggcacgcaacgaacgactgacctgcaaagaactcatcgagccccgcttggcggcgctc
ggctgggcgtggcaggagcagctgcgtatcgggcccgggcgcgtcaacttgaccggcgac
acgatgtacgacgaaacccagtcgatcattgccgactacctgctgcgctgccggggtgtg
ccgctggccatcgtggaagccaagtcagagtccgaaagcgctgccgatgggatgcagcag
gcctcccgttatgcacgccgactctcgctgcggttctcgattgcctccaatggcgatgac
tggatcttgacggacaacgaaaccggcgctttcgagtcactgagtgcaccgccgtcgccc
gacgagttggtcgcccggatgggcgtgtcggttgactggtcccgctgggagggcgcgttc
gccgctggctatcacatggaccaggtgtcacgcagaggcgtgcgcccgtatcaagacatc
gctatcaataaggcgctgtggcagttcgcccaaggtgacgaccgtgtgctgttgctgatg
gccaccggcaccggcaagaccttcaccatctttcagctcatttggaagctgctcaacggc
aaggcgctcaagcgtgaacacgtgctgttcctgaccgatcgcaatagtctcaaggatcag
gcctatcgtgccttctcggccttcacggcctcggagcgcgtgcagattgacaaggacacc
gttgcgcaagggcagcatctggtcggtaaggtcttctttgcaaattaccagagcctcgat
gaggagctggaaggcaagaaggtctatgaacactacgacccggacttcttcgatctggtg
gtcatcgacgaatgtcatcgctcgggttttggcgactggttcggcgttctcaaacatttc
ggcggcgcgctgcagctgggcctcacggccaccccgcgcgaactcgaagatggcgaccgc
tcgctgaccgcagaggaaaagcgccgcgacacgcagcactacttcggtgacccggttttc
atctacagcctcaagcaggccatcgaagacggcttcctggtgccctacctgttggaagag
cgcatcaccaacgtcgatgaggacggttacacgggccccgatggcaagcgctacaccacg
gccaacttcgagcgtgatatccgcatgccggatcgcaccaaggccattgcggaggacctc
tgggaggtgctgggcaagtacgagttgcgcgacgagaaaaccatcattttctgcgtggac
gacacccacgccgccttcatggcgcaggagctacgccgtctctcgggcagcgccgactac
gccgcgcgcattacccgggctgaacgcaacagccaccaactcgagcgcaacttcgccgtg
gtgggacccagcaacccgcgcgtggccgtgacagtggatctgctcaccacgggctttgat
gcgcccgacgtgaaaaacgtcgtcttcgtgcgcccgctgcgcagcgccattctctacaag
cagatgaaggggcgtggcacccggctgtgcgaggacattgacaagcgctatttcaccatc
ttcgactactccggcgctagccaactggaggatgccgagttcgatggccacccggcaaac
cgccagaaaggctacgagcagaagcggactaaaccgtcaaaggcagcggagcccagcgcc
aaatatctggcgcaaggagtgcgggtggtcatctctgccgagaaccgctacgtctgcctg
gccgacggacgcaaggtgccgttcgaggaatacacgcagcaatcgcgcgagttcatcctc
gacgttagccataagggcttggatgagctgctgcgcatctggatagacaaaggcggtcgt
caggagctgcgcgaggccttgcgcgaccgcgacatctacccagcggccttccggcattac
ctcgacctgcccgatgccgacgatgtcgacatcctagccaagatcggctttcagctgcct
cgcgtgccgaaccgcgctgaccgcgccaatcgactgtgggaccaagatcaaatttggctg
ctggaccatctgggcgaaaccgcgcagcctgagagccagcgcttcaaaacccatgtgtgg
caaaccgcgctggatcactaccgcctgttcggcatcgacgaccttgaacaggcacgcacc
tacggcgccccgcaatttgccgagcagttcggcagtttcaccacgctgactcagcgctac
ggtgggccggcgctgctcaagaccgacctcgaactggtcaagcagcatctttacgtggct
atggccgcctga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (17)   

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