KEGG   Rheinheimera sp. D18: E0Z06_04180
Entry
E0Z06_04180       CDS       T05923                                 
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
rhh  Rheinheimera sp. D18
Brite
KEGG Orthology (KO) [BR:rhh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rhh03019]
    E0Z06_04180
   03009 Ribosome biogenesis [BR:rhh03009]
    E0Z06_04180
   03036 Chromosome and associated proteins [BR:rhh03036]
    E0Z06_04180
Enzymes [BR:rhh01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     E0Z06_04180
Messenger RNA biogenesis [BR:rhh03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     E0Z06_04180
Ribosome biogenesis [BR:rhh03009]
 Eukaryotic type
  90S particles
   RNase
    E0Z06_04180
 Prokaryotic type
  rRNA processing factors
   E0Z06_04180
Chromosome and associated proteins [BR:rhh03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     E0Z06_04180
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm DND1_DSRM
Other DBs
NCBI-ProteinID: QBL08767
UniProt: A0A4P6VP35
Position
868082..868756
AA seq 224 aa
MQKSLNPLIARLGYQFQQPDLLEQALTHRSCKGQHNERLEYLGDAVLSLVIAETLYTHFP
KAREGDLTRMRAALVKGVTLAEIAQELRLSEYLRLGPGELKSGGFRRESILADAVEAILG
AIYLDSGMDACKERILFWFGSRLEVITPGEQKDSKTLLQEYLQGLRLALPVYDVIATLGE
AHQQTFTVRCTIAGMAPFTATGSSRRKAEQDAAHMALEKIKHDR
NT seq 675 nt   +upstreamnt  +downstreamnt
atgcaaaaatcgttaaatccactgatagcccgtttaggctatcagtttcaacagcccgac
ctattagagcaagcacttactcaccgcagttgtaaaggccagcacaatgaacggctagaa
taccttggcgacgcggtgctaagcttagtgattgctgaaaccctttatactcattttcct
aaagcgcgtgaaggtgacttaactcgcatgcgtgcggcgttggtaaagggggttaccttg
gccgaaattgcccaagaattacgtttatctgagtacttacgtttaggccctggcgagtta
aaaagtggcggttttcggcgcgagtctattttagctgacgcagtcgaggccattttaggt
gctatttatttagactctggcatggacgcgtgcaaagagcgtattttgttttggttcggc
tcacggttagaggttataacgccaggcgagcaaaaagattctaaaacattgctacaagaa
tatttgcaagggctgcgcttagcgctgccagtgtatgatgtaattgccactttaggtgaa
gcgcatcagcaaacgtttaccgtacgctgcactattgcaggtatggcaccttttaccgct
accggcagttcacgccgcaaggcagagcaggacgccgctcatatggcgctggaaaaaatt
aagcatgacagatag

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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