KEGG   Rheinheimera sp. D18: E0Z06_13435
Entry
E0Z06_13435       CDS       T05923                                 
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
  KO
K03582  exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
Organism
rhh  Rheinheimera sp. D18
Pathway
rhh03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rhh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    E0Z06_13435 (recB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rhh03400]
    E0Z06_13435 (recB)
Enzymes [BR:rhh01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     E0Z06_13435 (recB)
DNA repair and recombination proteins [BR:rhh03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     E0Z06_13435 (recB)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 PDDEXK_1 UvrD_C_2 AAA_11 DUF3860
Other DBs
NCBI-ProteinID: QBL10458
UniProt: A0A4P6VUC2
Position
complement(2855268..2858966)
AA seq 1232 aa
MSRVQQLDALTFPLHGNRLIEASAGTGKTYTLAALYLRLVLGHGQTAPADAAEPNNATAF
SHALTPPDILVVTFTRAATAELRDRIRARLVEAADAFRVGSSTDVILNGLLQSYNTAQYP
SCAGVLERAAQWMDEAAIFTIHGWCQRMLAEHAFDSGMAFGEQLSDDNQQLLHTLACDYW
RRFLYPLTDGQLLGELGNIAKSPEALLADIQPWLQADAVNMQFNANGKPLPAPLSPEQVA
APLAQWQQQMQQLCQQIQPLLQADVLQLLDDAFANSWLNGNKFKAPSWQAERQWWQAQLA
EPAQFNAHQAEFAKMVLKYSATNLAAAQKKGQPLVSHALFNQLDAVLELLNAKPQLAINV
RQHAALWLAAEFRQRKKQRAELDFNDLLLQLHQALKGEGGAVLAARIRSQYPVAMVDEFQ
DTDPIQFAIFRAIYPDVSSQTNALIMVGDPKQAIYSFRGADLYTYLQARSLTAGRHYSLS
KNFRSTKPLVDAVNQLFNQAELARGAFGFGLADTTPLPFINVAAQGKNTQLQQAGQSVPA
LNYWRIEANEGELKKGGYQTQMAEACANQITLLLQQAAAGNTGFVNESGKLSALQPSDIA
ILVRDRHEAALVRQQLSLRNVRSVYLSDNESIFQSAEASAVLYWLRACHQLEDDNLLRAA
LALPLCANTDGQLQHWLNDELAWEQLTEQIRDFRQIWRQKGVLAMISAWLHYFALPAKWL
AQDYGERCLTNVLHLAELLQSESAQRDGETGLIRWLNEQLDKGSANDEQQLRLESDQQLV
QVVTIHKSKGLQYNLVFLPFICGFKAAKKDRPQRYFDGEKMILDLTPDDAALEQAERGRL
LEDIRLLYVALTRPVYACWLGLAVFSEGNSKKSKLAQSALGYLLNLPPDCTNADLTAALA
GLPWQQQVMPAAHAGLVSAPLQQLTPALRLSTPLRRERWWIASYSALRTEGAMASTTDMP
SALAADTALDNLLQEESTEPLLHSEQQQSMHDFPRGAVPGTFLHQLLEDAQQQGFAHCDA
TFISGLLQQHLTRYNWQPWQPVLQPWLVQMLQVPLTGINQSLAQLQTVRAELEFWLQTEQ
VNVRKLDHYISQAILPGVPRPALLPDTLNGMLKGFIDLTLQAKDQRYWVLDYKSNWLGTN
NSDYNLENMQQALLARRYDVQAALYMLALHRLLKLRQPGYLAAPERSFGGAFYWFVRAPE
QGQLQLTAPFALLQQLDKLFSGQPVTDDANAN
NT seq 3699 nt   +upstreamnt  +downstreamnt
atgagtcgtgtgcagcagttagatgcgttaacttttccactgcacggcaaccggctaatt
gaagccagtgccggtacgggtaaaacctataccttggcggcactttatttacgtttagtg
cttggccatggtcaaactgcgcccgctgatgcggcagagccaaacaatgccacagcgttt
agccatgccttaacgccgccagatattttagtggttacctttacccgcgctgcaaccgca
gagctacgtgatcggatacgggcgcgcttagtcgaagccgctgacgcatttcgtgttggc
agcagcaccgacgtaattcttaatggcttattgcaaagctataacacagcgcaatatccg
tcttgcgctggtgtactagagcgtgccgcacagtggatggacgaagccgctatttttacc
attcatggctggtgtcagcgcatgttggcggaacatgcgttcgattccggtatggccttt
ggcgagcagcttagcgacgacaaccagcagttgttgcacacactagcctgtgactattgg
cggcggtttttatatccattaaccgacggccaattacttggtgagttaggtaatattgcc
aagtcgccagaagcgctactagcggatattcagccttggttgcaggccgatgcggtaaat
atgcagtttaatgctaacggtaaacccttgcctgcgccgcttagccccgaacaagttgcc
gcgccactagcgcagtggcaacagcaaatgcagcagctatgccagcagatacaacccttg
ttgcaagccgatgttttgcagttactcgacgatgcctttgctaatagttggctcaatggc
aataaatttaaagcgccaagctggcaagcagagcggcaatggtggcaagcgcagttagcc
gagcctgcgcagtttaatgctcatcaagccgagtttgccaaaatggtgcttaagtacagc
gctactaacttagcggcggcacaaaaaaaaggtcaaccgctagttagccatgcgttattt
aaccaactagatgcggtgcttgaattacttaatgccaagccacagttagcgattaatgtg
cgccagcatgcggcgctgtggttagcggctgaatttagacagcgaaaaaagcagcgcgcc
gagctcgattttaatgatctgttactgcagttgcatcaagcacttaaaggcgaaggcggt
gcggtattggccgccagaattcgtagccagtatccggtggcaatggtagatgagtttcaa
gataccgatccgatacagttcgcgatttttcgcgccatttatccagatgttagtagccaa
accaatgcgttaattatggttggcgatcccaaacaagctatttatagctttcgtggtgcc
gatttatatacttatttacaggcgcgcagcctaacggcagggcggcattacagtttaagt
aaaaactttcgctcaactaaaccgctagtcgatgcggttaatcagctatttaaccaagcg
gagctagcgcgcggggcctttggttttggtttggccgacaccaccccattgccgtttatt
aatgttgccgcacagggcaaaaacacgcagttacaacaagcagggcaaagtgtgcctgca
cttaattactggcgaattgaagctaacgagggcgagttaaaaaaaggcggctaccaaacg
caaatggccgaagcttgcgccaaccaaattaccttactactgcaacaagctgctgccggt
aacaccggctttgttaacgaaagcggtaagcttagtgcattgcaaccgtctgatattgcc
atcttagtgcgtgaccgccacgaagccgcattagtgcggcaacagcttagcctgcgcaat
gtgcgttcggtatatttatcagataacgagtctatttttcaaagtgctgaggccagcgct
gtgctgtattggttacgagcctgtcatcagttagaagatgacaatttactgcgcgcggcc
ttagcgctgccactctgtgctaataccgatggtcagctgcaacactggcttaatgacgag
ttagcgtgggagcaacttaccgagcaaattcgagattttcgacaaatttggcggcaaaaa
ggcgtgctagcgatgatcagtgcttggctgcattattttgccctgccagcaaaatggcta
gcgcaagattacggcgagcgctgcctaactaacgtattacatttagccgaattactgcaa
agcgaaagtgcgcaacgtgacggtgaaaccggtttaattcgctggctaaacgagcagcta
gacaaaggctcggccaatgacgagcaacaactgcgactagaaagcgatcagcaattagtg
caggtggtgaccattcataaaagtaagggtctgcaatataacctagtgtttctacccttt
atttgtggttttaaggcggcgaaaaaagatcgaccgcagcgctattttgatggcgaaaaa
atgatactcgatctcacgcccgacgatgcggcacttgaacaagctgagcgtggcaggtta
ctggaagatattcgtttattatacgtggcactaactcggccggtttatgcctgctggcta
ggcttagcggtatttagcgaaggtaatagcaaaaaatctaaactggcacaaagcgcgttg
ggctatttattaaatttaccgccagattgcactaatgccgatttaacggccgctttggcg
ggcctgccttggcaacaacaagttatgccagcggcacacgctgggctagtgagcgcacca
ctgcagcaacttacgccagcgctgcggctaagcacgccgctgcgacgtgagcgttggtgg
atagccagttattctgcactgcgcaccgaaggcgccatggccagcactactgatatgccc
tcggcactggccgcagatacggcgctagataacctattacaggaagaatctaccgagcca
ttactgcatagcgagcaacagcaaagtatgcatgatttccctcgcggcgctgtgccgggt
acgtttttacaccaattacttgaagatgcacagcagcagggttttgcgcattgtgacgcg
acctttattagcggcttattgcagcagcacctaacgcgctacaactggcaaccatggcag
ccggtattacagccttggttagtacaaatgctgcaagtaccattaaccggcattaaccaa
agcctagcgcagttacaaacggtgcgcgcggagctagagttttggttgcaaaccgagcaa
gttaatgtacgcaagcttgatcattatattagccaagctattttgcccggcgtgccaagg
ccagcgttgttacccgataccttaaatggcatgttaaaaggctttattgacttgacctta
caagctaaagaccaacgctattgggtactggattataaatcaaattggttaggtacaaat
aacagcgactataacctagagaacatgcaacaggcgctgctagcacggcgctatgacgtg
caagccgcgctatatatgctggcgctacataggttattaaagttgcgtcaacctggctat
ttagccgcgccagaacgttctttcggtggtgctttttattggtttgtgcgtgcgccagag
caaggccagctgcaacttacggcgccttttgccctgctacagcaattagataaactcttt
tccggccagccggtaacggacgatgccaatgcaaattaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (16)   

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