KEGG   Sinorhizobium fredii NGR234: NGR_c00410
Entry
NGR_c00410        CDS       T00888                                 
Symbol
miaB
Name
(GenBank) putative tRNA-i(6)A37 modification enzyme MiaB
  KO
K06168  tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
Organism
rhi  Sinorhizobium fredii NGR234
Brite
KEGG Orthology (KO) [BR:rhi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:rhi03016]
    NGR_c00410 (miaB)
Enzymes [BR:rhi01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.4  Transferring alkylthio groups
    2.8.4.3  tRNA-2-methylthio-N6-dimethylallyladenosine synthase
     NGR_c00410 (miaB)
Transfer RNA biogenesis [BR:rhi03016]
 Prokaryotic type
  tRNA modification factors
   Methylthiotransferases
    NGR_c00410 (miaB)
SSDB
Motif
Pfam: UPF0004 Radical_SAM TRAM TRAM_2
Other DBs
NCBI-ProteinID: ACP23845
UniProt: C3MF08
Position
43154..44554
AA seq 466 aa
MTQETALLPKSPRAGDEHVPARKVFVKTYGCQMNVYDSDRMSDALSRDGYVATDVLEDAD
FVLLNTCHIREKAAEKVYSELGRLRELKKAKASEGREMVIGVAGCVAQAEGNEILRRAPA
VDLVIGPQTYHRLPEALKRARSGERVVETDYAIEDKFEHLPAPDKAKTRSRGVTAFLTVQ
EGCDKFCTFCVVPYTRGAEVSRPVAQILAEAEKLVDGGVREITLLGQNVNAWHGAGPNGR
DWGLGDLLRRLGEIDGLARLRYTTSHPRDMDESLIEAHRSMAKLMPYLHLPVQSGSDRIL
KAMNRRHTAAEYLALVERIRAVQPDLALSGDFIVGFPGETEADFEETMRLVEVVGYAQAF
SFKYSTRPGTPGADLKDQVPEDVKAKRLERLQSLLVNQQRDFAAACVGREIDLLLEKPGR
MPGQLVGRSPWLQPVNVDAKRSQIGDIIKVRITKAGSNSLFAEMIE
NT seq 1401 nt   +upstreamnt  +downstreamnt
atgacccaggaaaccgctcttctgccgaaatcgccccgggcgggcgacgaacacgttccg
gcccgcaaggtcttcgtcaagacctatggctgccagatgaatgtctacgattccgatcgc
atgtccgacgctctgtcgcgggacggctacgttgcgacggacgtgctggaagatgccgac
ttcgtcctgctcaacacctgtcatatccgcgaaaaggccgccgaaaaggtctattccgag
ctcggccgcctgcgcgagctgaagaaggcgaaggcgagcgagggccgcgaaatggtgatc
ggcgtcgccggctgcgtcgcccaggccgaaggcaatgaaatcctgcggcgcgctccggcc
gtcgatctcgtcatcggcccgcaaacctaccatcggctgccggaagccttgaagcgtgca
aggagcggcgagcgggtcgtcgagacggattacgccatcgaggacaagttcgagcatctg
ccggcaccggacaaggcgaagacccgttcgcgcggggtaacagccttcctcaccgtgcag
gaggggtgcgacaagttctgcaccttctgcgtggtgccctacacccgcggcgccgaggtc
tcgcggccggtggcgcagatcctcgccgaggcggaaaagctggtcgacggcggcgtgcgc
gagatcacgctgctcggccagaacgtcaatgcctggcacggggcggggcccaacggccgc
gattggggccttggagatctgttgcgccgtctcggcgagatcgacggcctcgcgcgcctg
cgctacaccaccagccacccgcgcgacatggacgagagcctgatcgaggcgcaccggtcg
atggccaagctgatgccctatctgcatctgccggtccagtccggctccgatcgcatcctg
aaggcgatgaaccggcgccatacggcggccgaatatctcgcccttgtcgaaaggatccgt
gccgtccagcctgatctggcactttccggcgatttcatcgtcggcttccccggcgagacc
gaggcggatttcgaggagacgatgcgcctcgtcgaggtggtcggttatgcacaggcattc
tccttcaaatattcgacccgtcccggtacgccgggcgccgatctaaaggatcaggttccc
gaagacgtgaaagccaagcgactggaaagattgcagagtttgcttgtcaaccagcagcga
gactttgccgccgcctgcgtcgggagggaaatcgatctgctgctggagaagcccggccgc
atgcccggccagctggtcggccgctcgccttggctgcagcccgtgaatgttgatgcaaaa
cgatcgcaaatcggtgacattatcaaggtacgaatcaccaaggccggctcgaacagcctg
tttgccgagatgatcgaataa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (24)   

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