KEGG   Sinorhizobium fredii NGR234: NGR_c29040
Entry
NGR_c29040        CDS       T00888                                 
Symbol
soxB1
Name
(GenBank) sarcosine oxidase, beta subunit
  KO
K00303  sarcosine oxidase, subunit beta [EC:1.5.3.24 1.5.3.1]
Organism
rhi  Sinorhizobium fredii NGR234
Pathway
rhi00260  Glycine, serine and threonine metabolism
rhi01100  Metabolic pathways
Module
rhi_M00975  Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:rhi00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    NGR_c29040 (soxB1)
Enzymes [BR:rhi01000]
 1. Oxidoreductases
  1.5  Acting on the CH-NH group of donors
   1.5.3  With oxygen as acceptor
    1.5.3.1  sarcosine oxidase (formaldehyde-forming)
     NGR_c29040 (soxB1)
    1.5.3.24  sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
     NGR_c29040 (soxB1)
SSDB
Motif
Pfam: DAO Thi4 Pyr_redox_3 NAD_binding_8 Trp_halogenase FAD_oxidored FAD_binding_2 Pyr_redox_2 FAD_binding_3 Pyr_redox HI0933_like Rhodanese MCRA
Other DBs
NCBI-ProteinID: ACP26648
UniProt: C3MIT5
Position
complement(3046197..3047450)
AA seq 417 aa
MRKYSVFAVAREALRGHKGWGPHWASPEPRPQYDVIIIGGGGHGLGAAYYLAKEHGITNV
AVLEKGWIGGGNTGRNTTIIRSNYLYEESMDIYEHSLKLWENLSQDLNYNVMYSPRGVMM
LSHNIHDQQSFKRHINANRLYGIDNEWLTPEQAKAYCPPLDIAKSARYPINGAALQRRGG
TARHDAVAWGYARAASDRGVHIIQNCEVTGIRRDETGRVTGVDTNRGFIGAKKVGISAAG
HSSVLMQMADVRVPLQSQPLQALVSEPLKPIFPCVVMSNSVHAYISQSDKGEFVIGAGTD
QYNSYSQTGGLQIITHTLDAICELFPMFRRVKMMRQWGGIVDVTQDRSPIQGVTPVPGLY
LNAGWGTGGFKATPGSANLFAHLIARGEPHRLSAGLTLERFRTGRLIDEAAAAAVAH
NT seq 1254 nt   +upstreamnt  +downstreamnt
atgcgcaaatattctgttttcgccgtggcgcgcgaggcattgcggggccacaagggctgg
ggcccccactgggcctcgccggaaccacgcccgcaatatgatgtgatcatcatcggcggt
ggcgggcatggccttggggcggcctattatcttgccaaggagcacggcatcaccaatgtc
gccgtgctcgagaagggctggatcggcggcggcaataccggccgcaacacgacgatcatc
cggtccaactatctctatgaagagagcatggacatctacgagcattcgttgaagctctgg
gagaacctgtcgcaggacctcaactacaacgtcatgtactcgccgcgcggcgtcatgatg
ctgtcgcacaacatccacgaccagcagtccttcaagcggcacatcaatgccaaccggctc
tacggcatcgacaacgaatggctgacgccggaacaggcaaaagcctattgtccgccgctc
gatatcgccaagagcgcccgctacccgatcaacggtgcggcactgcagcggcgcggcggc
acggcgcgccacgacgccgttgcctggggctatgcccgcgcggcgtccgaccgcggcgtg
cacatcattcagaactgtgaagtgaccggcatccgccgcgacgaaaccggccgggtcacc
ggcgtcgacaccaatcgcggcttcatcggcgcgaagaaggtcggcatttccgcggccggc
catagctccgtgctgatgcagatggcggacgtgcgcgtgccgctgcagagccagccgctg
caggccctggtctccgaacccttgaagccgatcttcccctgcgtggtgatgtcgaactcg
gtgcatgcctatatctcgcagtcggacaagggcgagttcgtcatcggcgccggtaccgac
cagtacaattcctattcgcagaccggcggcctgcagatcatcacccatacgctcgacgcg
atctgcgagctcttcccgatgttccgccgcgtcaagatgatgcggcaatggggcggcatc
gtcgacgtgacgcaggatcgctcgccgatccagggcgtgacgccggtccccggcctctat
ctcaatgccggctgggggacgggcggcttcaaggcgacgccgggctcggccaatctcttt
gcccatctcatcgcgcgcggggagccgcacaggctctctgcggggctgacgctcgagcgc
ttccgcaccgggcggctcatcgacgaggcggcagctgccgccgtagcgcactag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (4)   
   KEGG ENZYME (2)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (13)   
   Pfam (13)   
All databases (35)   

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