KEGG   Rhodoblastus sp. SSC7: HZY79_05950
Entry
HZY79_05950       CDS       T06718                                 
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
  KO
K01975  RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
Organism
rhj  Rhodoblastus sp. SSC7
Brite
KEGG Orthology (KO) [BR:rhj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:rhj03016]
    HZY79_05950 (thpR)
Enzymes [BR:rhj01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.4  Phosphoric-diester hydrolases
    3.1.4.58  RNA 2',3'-cyclic 3'-phosphodiesterase
     HZY79_05950 (thpR)
Transfer RNA biogenesis [BR:rhj03016]
 Prokaryotic type
  tRNA spricing factors
   Other tRNA splicing factors
    HZY79_05950 (thpR)
SSDB
Motif
Pfam: LigT_PEase 2_5_RNA_ligase2 HVSL
Other DBs
NCBI-ProteinID: QLP97024
UniProt: A0A7L5XWW4
Position
1241109..1241648
AA seq 179 aa
MPRLFAALEIPDDLAADLATLRGGLFGARWVEEEDLHLTLRFFGDIDERLAEEIEGELAD
IRKPSFAVTLERLDWFGGDRPRAIIVKAKASPELVALQSKIETAMRRLGAPPEPRKFAPH
VTLARLRGASVAGVADYLSARSFFASRRFVAHRFALFSAREAVGGGPYVVERAFPLAAA
NT seq 540 nt   +upstreamnt  +downstreamnt
atgccgcgtctgttcgccgctctggagatacccgacgatctcgccgcggatctggcgacg
ctgcgcggcggcctgtttggcgcgcgctgggtcgaggaggaggacctccacctcacactg
cgcttcttcggcgacattgacgagcggctggccgaggagatcgagggcgaactcgccgat
atccgcaaaccgtcctttgcggtgacgctggaacggctcgactggtttggcggcgaccgt
ccgcgcgcgatcatcgtcaaggcgaaggcctcgcccgagctggtcgccttgcaaagcaaa
atcgaaaccgcgatgcgccgtctcggcgcgccgcccgaaccgcgcaaattcgccccgcat
gtcacgctggcgcgcttgcgcggcgcctccgtggcgggggtggcggattacctgtcggcg
cgcagcttcttcgcgtcgcgccgtttcgtcgcacaccgtttcgcgctgttctccgcgcgc
gaagcggtcggcggngggccctatgtcgtggaacgggcgtttccgctcgcggcggcctaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

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