KEGG   Rhizobium sp. Kim5: Kim5_CH00438
Entry
Kim5_CH00438      CDS       T05501                                 
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
  KO
K01439  succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
Organism
rhk  Rhizobium sp. Kim5
Pathway
rhk00300  Lysine biosynthesis
rhk01100  Metabolic pathways
rhk01120  Microbial metabolism in diverse environments
rhk01230  Biosynthesis of amino acids
Module
rhk_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:rhk00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    Kim5_CH00438 (dapE)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:rhk01002]
    Kim5_CH00438 (dapE)
Enzymes [BR:rhk01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.18  succinyl-diaminopimelate desuccinylase
     Kim5_CH00438 (dapE)
Peptidases and inhibitors [BR:rhk01002]
 Metallo peptidases
  Family M20
   Kim5_CH00438 (dapE)
SSDB
Motif
Pfam: Peptidase_M20 M20_dimer Peptidase_M28
Other DBs
NCBI-ProteinID: ARQ56557
Position
complement(434809..436002)
AA seq 397 aa
MTATDPVANLQTLIRCPSVTPAEGGALAALDAMLTPLGFTVDKVTAREEGTADIENLYAR
LGRDGPHLMFAGHTDVVPVGDEGAWTHPPFAAEISKGELFGRGAVDMKGGIACFVAAVAR
HIEKNGEPAGSISLLITGDEEGPAINGTVKLLQWAAERGEHWDACLVGEPTNPDRLGDMI
KIGRRGSLSGRITVHGVQGHAAYPHLADNPVRGIVQLTQALMDPPFDGGTDDFQPSNLEV
TTVDVGNPATNVIPAKASASFNIRFNDSWTVDTLRAEILRRLDAAAGDGQLRPGREPVKY
DIVWADRPSHVFLTRNNALIASLSSAVESVTGRSPALSTTGGTSDARFIKDYCPVVEFGL
VGQTMHMVDERVAVADLETLTAIYETFIDRWFAHAGS
NT seq 1194 nt   +upstreamnt  +downstreamnt
atgaccgctaccgaccccgtcgccaatctccagacgttgattcgctgcccgtccgtgacg
cccgccgaaggcggcgcgctcgcggcgctcgacgccatgctcacgccgctcggctttacg
gtcgacaaggtgacggcacgcgaagagggcacagccgatatcgagaacctctatgcccgc
ctcggccgcgacggcccgcacctgatgtttgccggccacaccgacgtcgtgccggtcggc
gacgagggcgcctggacacatccgccgtttgccgccgagatatcaaagggcgagctcttc
ggccgcggcgccgtcgacatgaagggcggcatcgcctgcttcgtcgcagccgtcgcccgc
catatcgaaaagaacggcgagccggccggctcgatctccctgctgattaccggcgacgaa
gaaggtccggcgatcaacggcacggtcaagctgctgcaatgggcggctgagcgcggcgag
cactgggacgcctgcctggtcggtgaacccacaaatcccgaccggctcggcgacatgatc
aagatcggccggcgcgggtcgctgtcgggcaggatcaccgtgcacggagtgcagggccac
gccgcctatccccacctcgccgacaatccggtgcgcggcatcgtccagctgacgcaggcg
ctgatggatccgcccttcgacggcggcaccgacgatttccagccgtcgaacctcgaagtg
acgacggtcgatgtcggcaatcctgccaccaacgtcattccggcaaaggcatcggcaagc
ttcaacatccgcttcaacgacagctggacggtcgacacgctgcgtgcggaaatcctgcgg
cggctcgatgccgccgcaggcgacggtcaactgcgtccgggccgggagccggtgaaatac
gatatcgtctgggccgaccggccgagccacgtctttctcacccgcaacaatgctttgatc
gcctcgctgtcttcggccgtcgaaagcgtcaccggccggtcgccggcgctttcgaccacc
ggcggcacgtccgatgcccgcttcatcaaggactattgcccggttgtcgagttcggcctg
gtcggtcagacgatgcacatggtcgacgagcgtgtcgccgttgccgatctggagacgctg
acggcgatctacgagaccttcatcgaccgctggttcgcccatgccgggtcttaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (5)   
   KEGG PATHWAY (4)   
   KEGG MODULE (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (21)   

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