KEGG   Rhizobium sp. Kim5: Kim5_CH00639
Entry
Kim5_CH00639      CDS       T05501                                 
Name
(GenBank) ATP-dependent DNA helicase Ku-type protein
  KO
K10979  DNA end-binding protein Ku
Organism
rhk  Rhizobium sp. Kim5
Pathway
rhk03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:rhk00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    Kim5_CH00639
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rhk03400]
    Kim5_CH00639
DNA repair and recombination proteins [BR:rhk03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     Kim5_CH00639
SSDB
Motif
Pfam: Ku
Other DBs
NCBI-ProteinID: ARQ56749
Position
complement(636460..637314)
AA seq 284 aa
MAARASWKGHLKVGDLACAVGLYTAISSSDRVSFNIINRRTGHRVERQFVDSETGKPVER
DDQVKGYQMENGDYIVIEGDEIAEIMPESDKVLNVKAFIAYDDIDKLYFDRPYYLAPVDE
HDEEALSLIVRGMRDGKVAALAEAVLFKRNRTLLIRPHDSHIVATMLNFDYEVRSADTVF
KDIPDIKFDKEMLELAGHIIETKHGSFDPSAYEDRYEAALVELVKAKIEGREPPKQKPAP
ERKVVDLMEALRQSAKITGKGAAKKTPAKKKAPARSDSQKKKAG
NT seq 855 nt   +upstreamnt  +downstreamnt
atggccgcgcgggcaagctggaaaggtcatctgaaggtaggcgaccttgcttgcgccgtc
gggctctataccgccatttcctcctccgaccgcgtttccttcaacatcatcaaccgcagg
accggccatcgggttgaacggcagttcgtcgacagcgagaccggcaagccggtcgagcgg
gacgatcaggtcaagggctaccagatggagaatggcgattacatcgtcatcgaaggcgac
gagatcgccgagatcatgccggaaagcgacaaggtgctcaacgtcaaggctttcattgcg
tatgacgatatcgacaagctctatttcgaccgtccctattatctcgcgcccgtcgacgaa
catgacgaagaagcgctgtcgctgatcgtccggggcatgcgcgacggcaaggtggcagcg
ctcgccgaagccgtgctcttcaagcgcaaccggacgctgctgatccggcctcatgacagc
cacatcgtcgcgaccatgctcaacttcgactatgaggtgcgctcggccgacactgtcttc
aaggacattcccgacatcaagttcgacaaggagatgcttgaactcgccggccatatcatc
gagaccaagcacggcagtttcgatccgagcgcctacgaggaccgttacgaagctgctctc
gtcgaactggtgaaggcaaagatcgagggccgggagccgccgaagcagaagccggcgccg
gaacgcaaggtcgtcgacctgatggaggcgctacgccagagcgccaagataaccggtaag
ggtgcggctaagaaaacgccggcaaagaagaaggcgccggcgcgcagcgacagccagaaa
aagaaggcaggctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (8)   

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