KEGG   Rhizobium sp. Kim5: Kim5_CH01469
Entry
Kim5_CH01469      CDS       T05501                                 
Name
(GenBank) uracil-DNA glycosylase-like protein
  KO
K21929  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
rhk  Rhizobium sp. Kim5
Pathway
rhk03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:rhk00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Kim5_CH01469
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rhk03400]
    Kim5_CH01469
Enzymes [BR:rhk01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     Kim5_CH01469
DNA repair and recombination proteins [BR:rhk03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Kim5_CH01469
SSDB
Motif
Pfam: UDG
Other DBs
NCBI-ProteinID: ARQ57566
Position
complement(1479380..1480270)
AA seq 296 aa
MISANDLSPAELAALLHFHADAGVEWLLEEEAVDRFAEFEAMKAARRPGSAQQDRPAAGE
RPSVGERQTSPRPTAAARPAPASGPQPAIPDGEAVQQARFVAESARSLSELKTALEAFNG
CNLKHSARSTIFADGDAESGIMVIGSAPSAEDDREGLPFSGKSGQLFDKMLAAIGLDRSS
VLLTQVIPWRPPGNRAASAAEIDICRPFIERQIALAEPQVILLLGNFAARFFFGENDTIH
GLRGRWKDIVIADRAIPAIASLHPQDLLTAPVNKRLAWNDLLAFQAKLKSLSLLRN
NT seq 891 nt   +upstreamnt  +downstreamnt
atgatctccgccaacgacctctcccctgccgagcttgcagcgcttctgcatttccatgcg
gatgccggcgtggagtggctgctggaggaagaggcggtcgaccgcttcgccgagttcgaa
gcgatgaaggcggcgcgccgcccgggatcggcgcagcaggaccgtcctgcggccggggag
cgtccaagcgtcggggagcgtcagacatcgccgcgcccgactgcggcagcacgtccagcc
ccagcctccggcccgcaaccggcgatcccggatggcgaggcggtgcagcaggcgcgtttc
gtcgccgaaagcgcgcgctcgcttagcgaactgaagaccgcgctcgaagccttcaacggt
tgcaatctcaagcacagcgcccgctcgaccatctttgccgacggcgacgccgaaagcggc
atcatggtgatcggctcggccccgagcgccgaagacgaccgagaaggcctgcctttctcg
ggtaagtccggccagttgttcgacaagatgctggcggcgatcgggctcgatcgctctagc
gttctgctgacgcaagtcattccctggcgcccgccaggtaaccgggcggcatcggcggcc
gagatcgacatctgccggcccttcatcgaacgacagattgcgctcgccgaaccgcaggtg
atcctgctgctcggcaatttcgcggcgcgattcttcttcggggaaaacgatacgattcac
ggcctgcggggccgctggaaggacatcgtcatcgccgatcgtgccattccggccatcgcc
agcctgcatccccaggatctgttgaccgcacccgtcaacaagcggctcgcctggaacgat
cttctcgcctttcaggcaaaactcaaatccctctctctgctcagaaattag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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