KEGG   Rhizobium sp. Kim5: Kim5_CH03841
Entry
Kim5_CH03841      CDS       T05501                                 
Name
(GenBank) RNA polymerase sigma factor protein
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
rhk  Rhizobium sp. Kim5
Brite
KEGG Orthology (KO) [BR:rhk00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rhk03021]
    Kim5_CH03841
Transcription machinery [BR:rhk03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     Kim5_CH03841
SSDB
Motif
Pfam: DUF6596 Sigma70_r2
Other DBs
NCBI-ProteinID: ARQ59847
Position
3864291..3865541
AA seq 416 aa
MSANAGRAAEQVARQSYGKLIAFLAARSRDVPAAEDALSEALASALRVWPERGIPGNPEA
WLLVAARRNLMQAARHRIVAANAQTTISLAFEEAEERMNEAGNSVFPDERLKLLFACTHP
AIDSSVHTALMLQTVLGIEARTVARAFVVSPQAISQRLVRAKVKIRDAGIPFAVPPRPAL
PERLAAVLSAIYVAYGLGWDGLDGEEAHQSLAAEAIWLGRALLTVLPDEPEAIGLLSLML
HCEARRDARRDGEGRYVPLDEQDTAAWNAIMIAEADALLRKAGGFERFGPFQCQAAIQSV
HAARRLSGSTDWQALTTLYAALLEMKPTLGARVAEAAVIGRASSAAEGLDRLDRIDPRAI
AAYQPYWAVRAFLLARAGDNTAAADAYVTAIGLSDSPAVRAFLADRLEECRQTISS
NT seq 1251 nt   +upstreamnt  +downstreamnt
atgtccgccaatgccggacgcgccgccgaacaggtagcgcgtcagtcttacggcaagctg
atcgcctttctcgccgcccgctcgcgtgacgtgccggcggcggaagacgcattgtcggag
gcgctggcttcggccttacgcgtctggccggagcgcggcattcctggcaatccggaagcc
tggctgctggtcgccgctcgccgcaacctcatgcaggcggcccgccaccgcatcgtcgcg
gccaacgcccaaacgacgatatcgctcgccttcgaggaagcggaggagcgcatgaacgag
gctggcaattccgtttttcccgatgagcggctgaagctgctctttgcctgtacccaccct
gccatcgacagctccgtgcatacggcgctgatgctgcagacggttctcggcatcgaggcg
agaaccgtcgcacgggccttcgtcgtttcgccgcaagcgataagccagcggctggtgcgg
gccaaggtgaagatccgtgatgccggcattcccttcgccgttccgcctcggcccgccctg
ccggagcggctggccgccgtgctctcggcaatctacgttgcctacggcctcggatgggat
ggccttgacggcgaggaggcgcaccagtcgcttgccgccgaagcgatctggctcggccgg
gcgctgctgacggtgctgccggacgagccggaagcgatcggcctcctgtcgctgatgctt
cactgcgaagcccgccgtgatgcccgacgcgacggtgagggccgatatgtgccgctggac
gagcaggacacggcagcctggaacgcgatcatgatcgccgaggcagacgcattgctgcgc
aaggccgggggcttcgagcgtttcggcccctttcagtgtcaggcggcaattcaatccgtg
catgcggcgcgccgcctttccgggtcgaccgactggcaggcgctgacgacgctctatgcc
gcgctgctggagatgaagccgacgctcggcgcccgcgtcgccgaggcggcggtgatcggc
agggcctcgagcgccgccgaaggcctcgaccggctcgacaggatcgatccgcgcgccatc
gcggcttatcagccctactgggcggtgcgtgcctttcttctggcacgggccggcgacaat
accgccgcggccgacgcctacgtgacagcgataggcctcagcgacagtcccgccgttcgc
gcctttctcgccgaccggctcgaggagtgccggcagacaatatcaagctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (8)   

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