KEGG   Rhizobium favelukesii: LPU83_pLPU83d0571
Entry
LPU83_pLPU83d0571 CDS       T03046                                 
Name
(GenBank) Urea amidolyase
  KO
K01941  urea carboxylase [EC:6.3.4.6]
Organism
rhl  Rhizobium favelukesii
Pathway
rhl00220  Arginine biosynthesis
rhl00791  Atrazine degradation
rhl01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:rhl00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00220 Arginine biosynthesis
    LPU83_pLPU83d0571
  09111 Xenobiotics biodegradation and metabolism
   00791 Atrazine degradation
    LPU83_pLPU83d0571
Enzymes [BR:rhl01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.4  Other carbon-nitrogen ligases
    6.3.4.6  urea carboxylase
     LPU83_pLPU83d0571
SSDB
Motif
Pfam: CT_A_B CPSase_L_D2 Biotin_carb_N CT_C_D Biotin_carb_C Biotin_lipoyl Dala_Dala_lig_C Biotin_lipoyl_2 ATP-grasp HlyD_3 ATP-grasp_5
Position
pLPU83d:complement(592231..595770)
AA seq 1179 aa
MFKKVLIANRGEIAVRIIKTLQRMGIASVAVYSDADRFSKAVLMADEAVRLGPAPASESY
LDVDAVIAACKATGAEAVHPGYGFLSENIGFAERLAKEGIAFIGPTPGNIAAFGLKHTAR
ELARESGVPLLRGSTLLETSDDALTAATDIGYPLMLKSTAGGGGIGMQLCDNPESLKAAF
ESVQRTARASFGDARVYLERFVARARHVEVQIFGDGNGRVIALGERDCSLQRRNQKVIEE
TPAPGLSDAVRTRLHAAAVALGASAHYRSAGTVEFIYDPAGEEFYFLEVNTRLQVEHPVT
EAVFGIDLVEWMIRQAAGEDVLAGKENLVPKGAAIEARIYAEMPHAGFRPSAGLLTEVVF
PENVRVDGWIETGTEVSSYYDPMLAKVIVKAKDRPAAIEALGKALEDSAISGIETNLDYL
KAIAASDLLASGNVATTALKDFVFVPDVVEVIAPGAQSSLQELPGRLGLWHVGVPPSGPM
DERSFRHANRVLGNADETAALEITVSGPVLKFFSDVTVALAGAQMPMTLDGTPVQHGMAI
LVKAGQTLAIGAIAGAGQRSYLAVAGGFAAPEVLGSRATFGLGKFGGHATGTLRAGHVLR
LARVPQSVSKPANEPVRLTRDWEVGVLYGPHGAPDFFLEEDIETLFATEYEVHFNSARTG
VRLIGPAPKWARADGGEAGLHPSNLHDNAYAVGAIDFTGDMPIILGPDGPSLGGFVCPAV
IARDEQWKMGQFKPGDKIRFRALKRAEDPIAGPMVKRIGDDAGAAIIGRNEVGPVPVVYR
RQGDDNLLVEYGPMQLDIALRLRVHLLMQAITDAKLPGLVDLTPGIRSLQIHYDGTGLTR
TRLVGLLTEIEACLPPAQAVKVPSRVVHLPLSWNDPDAELAMRKYQELVRPNAPWCPSNI
EFIRRINGLADEQAVRNIVFDASYIVLGLGDVYLGAPVATPMDPRHRLVTTKYNPARTWT
PENAVGIGGAYMCIYGMEGPGGYQLFGRTIQVWNTWHQTPVFSKEKPWLLDFFDQIRFFP
VSHEELTEARAAFPHGGYPIRIEETEFSYAAYEAELAVNAQAIGAFKANQQLAFEAERQR
WKDFGLDSFVVDEAGTGPGLGGDIPEGCFGIESAVPGNVWKILVEEGQPVASGETLAIIE
SMKMEINVTAHAAGRVRDLRAGPGRNVKAGDVLVVLEEI
NT seq 3540 nt   +upstreamnt  +downstreamnt
atgttcaagaaggttctgatcgcaaaccggggcgaaatcgctgtccggatcatcaagacg
ttgcagcgcatgggtattgcctccgtcgccgtctattcggatgccgaccgcttttccaag
gctgtactgatggcggacgaggcggtacggctcggtccggcaccggcgtccgaaagctac
ctcgacgtcgacgccgtcatcgctgcctgcaaggcgaccggtgccgaagccgtgcatccg
ggctacggcttcctgtcggagaatatcggctttgccgagcggctggcgaaggaaggcatt
gccttcatcggcccgacgcccggcaatatcgccgccttcgggctgaaacatactgcccgc
gagctggcgcgcgaaagcggtgtgccgctacttcgcggcagcacactgttggagacgagc
gacgacgcgctcacggccgcgaccgacatcggctatccgctgatgctgaaatcgaccgcc
ggcggcggtggcatcggcatgcagctttgcgacaaccccgaaagcctgaaggcagccttc
gagagcgtgcagcgtaccgcgcgcgcaagcttcggcgatgcccgcgtctatcttgaacgc
tttgtcgccagggcccgccatgtcgaagtgcagattttcggcgacggcaatggccgggtg
atcgcgcttggcgaacgcgactgctctttgcagcgccggaaccagaaggtgatcgaggag
acgccagcgccggggttgtccgacgccgttcgaacccgcctgcatgcagcggccgtcgcc
ctcggcgcctccgcccactaccggtcggcgggaacggtcgaattcatctatgatccggct
ggcgaggaattttatttccttgaggtcaacacccggctgcaggtcgagcatccggtcacc
gaagcggtcttcggcatcgatctcgtcgagtggatgatccgccaggccgcgggcgaagac
gtgctcgccggcaaggagaatctcgttcccaagggtgctgccatcgaggcgcgcatctat
gccgaaatgccgcatgccgggttcaggccaagtgctggacttctgaccgaggttgtcttt
cccgaaaacgtgcgtgtcgacggttggatcgagacgggcacagaggtaagctcctattac
gatcccatgctcgccaaggtgatcgtgaaggctaaggatcgccccgccgcaatcgaggca
ctcggcaaggcgctcgaggacagcgcgatttccgggatcgagaccaatctcgattatctg
aaagcgatcgcggcttccgatctgctggcgagcggcaatgtggcaacgacggcactcaag
gattttgtcttcgtgccggatgtcgtcgaagtaatagcgccgggcgctcaatcgagcctg
caggaactgcccggacggctgggtctctggcatgtcggggtgccgccaagcggaccgatg
gacgaacgatccttccgccatgccaaccgggtgctcggaaacgccgacgaaacggcggca
ctcgagattaccgtctccggccctgtgctcaaattcttctcggatgtcacggtcgcactg
gccggcgcacaaatgccgatgacactcgacggcacgccggttcagcacggcatggcaatc
ctcgtaaaggcgggccaaacgcttgcgatcggggcgatcgccggtgccgggcagcgctcc
tatctcgccgtcgcgggcgggttcgcggccccggaagtgctcggttcgcgcgcaaccttc
ggcctgggcaagttcggtggtcatgccacgggaacgcttcgcgccggacatgtgctgcgg
ctggcgcgtgttccgcagtcagtatcaaagccggctaatgagccagtccggctcacgcgc
gactgggaggtcggcgtgctctacggtccccatggcgctcccgatttctttctggaggaa
gatatcgaaacgctgtttgccaccgaatacgaggttcatttcaacagcgcccgcaccggc
gtgcgcctgatcggccccgcgccaaaatgggcgcgcgccgacggcggcgaagcgggactt
catccatccaacctgcacgataatgcctatgcggtgggcgcaatcgacttcaccggcgac
atgccgatcattctcggccccgacggcccaagcctcggcggcttcgtctgcccggcggtg
attgctcgcgacgagcaatggaagatgggtcagttcaaaccgggcgacaagatccgcttc
cgtgctctaaaacgcgccgaggacccgatcgccgggccgatggtgaagcgcatcggcgac
gatgccggtgccgcgatcatcggacgcaacgaggtgggaccggtccccgtggtctatcgc
cgccagggcgacgacaatctgctggtcgagtacggaccgatgcagctcgatatcgcgctg
cgcctgcgcgtgcatctgctgatgcaggcgatcacggacgcgaagcttccggggctcgtc
gatctcacgcccggcatacggtcgctgcagatccactatgatggaaccggtcttacccgc
acgcgcctcgttggcctcttgaccgagatcgaggcttgcctgccgccggcgcaggcggtg
aaggtcccgagccgggtcgtgcatctgccgctctcctggaacgatcccgacgccgaactt
gcgatgcgcaaataccaggagcttgtccgccccaatgcgccatggtgcccgtcgaatatc
gagttcatccgccgcatcaacggcctggccgacgaacaggcggtgcgcaacatcgtcttc
gacgccagctatatcgtcctcgggctcggcgacgtctatctcggcgcgccggtggccaca
ccgatggacccgcgccatcgtctggtgacgaccaaatataatccggcccgaacctggacg
ccggaaaacgccgtcggcatcggcggcgcctatatgtgtatctacggcatggaaggtccg
ggcggctatcagcttttcggccgcacgatccaggtctggaacacctggcaccagacgcca
gtcttttccaaggaaaagccctggctgctcgacttcttcgatcagatccgcttcttcccc
gtgagccatgaggaactgaccgaggcgcgcgccgccttccctcacggcggctatccgatc
cgcatcgaggagaccgaattcagctatgcggcctatgaagcggagcttgccgtcaacgcg
caggccatcggcgcctttaaggccaaccagcaattggccttcgaggccgaacgccagcgc
tggaaggatttcggcctcgacagttttgtcgtcgacgaggccggcaccggtcctgggctt
gggggcgatattccagaaggctgcttcggcatcgaaagcgccgtgcccggcaacgtctgg
aagatcctcgtcgaagaaggccagccggtcgcctccggcgagacgcttgccatcatcgaa
tccatgaagatggaaatcaatgtgaccgcccatgccgccgggcgcgtccgcgatctgcgc
gcgggccccggccgcaacgtgaaagccggcgatgtcctcgtcgtcttggaggaaatctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   OC (1)   
Protein domain (11)   
   Pfam (11)   
All databases (27)   

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