KEGG   Rhodovulum sp. MB263: B5V46_11930
Entry
B5V46_11930       CDS       T04771                                 
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
rhm  Rhodovulum sp. MB263
Pathway
rhm00300  Lysine biosynthesis
rhm00470  D-Amino acid metabolism
rhm01100  Metabolic pathways
rhm01110  Biosynthesis of secondary metabolites
rhm01120  Microbial metabolism in diverse environments
rhm01230  Biosynthesis of amino acids
Module
rhm_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:rhm00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    B5V46_11930
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    B5V46_11930
Enzymes [BR:rhm01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     B5V46_11930
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: ARC89267
UniProt: A0A1V0HZ73
Position
complement(2555656..2556921)
AA seq 421 aa
MDHFLYRDGALHAEDVPLSEIAAAVGTPFYCYSVATLTRHFRLFDEALAGTDHLVCYAMK
ANSNLAVLKLMGDLGAGIDVVSGGEYRKARAAGVPGERIVFSGVGKTREEMRLALEGGIR
QFNVESEPEMAALDEVARAMGLVAPIAVRVNPDVDAKTHEKIATGKSENKFGIPIARARE
VYARAAAMPGLDVLGIDVHIGSQLTELDPFELAYGKVAELTKLLRADGHDIRRLDLGGGL
GIPYERSNAAPPLPVEYGAMVRRVLGDLDVEIEIEPGRLIAGNAGVLVSRVIYVKEGEGR
TFLILDAAMNDLVRPSMYGAWHDIVPLNEPAAGIGYAPHDVVGPVCETGDTFAKARDLPP
MAEGDLVAFRSAGAYGAVMASEYNTRPLVPEVLVSGDHFAVIRQRPSFDEIINRDTIPEW
L
NT seq 1266 nt   +upstreamnt  +downstreamnt
atggaccatttcctgtaccgggacggcgcgcttcatgccgaggacgtgccgctgagcgag
atcgcggccgctgtcggcacgcccttctactgctattccgtggccacgctgacccggcat
ttccgtctcttcgacgaggctctggcaggcaccgaccatctggtctgctatgcgatgaag
gccaattcgaacctcgcggtgctcaagctgatgggcgatctcggtgcgggcatcgacgtc
gtgtcggggggcgagtaccgcaaggcgcgcgcggcgggcgtgccgggcgagagaatcgtc
ttttccggcgtcggcaagacccgcgaggagatgcgcctggcgctcgagggcggcatccgc
caattcaacgtcgaatccgagcccgagatggcggcgctcgacgaggtcgcgcgcgcgatg
gggctggtcgcgcccatcgccgtccgggtgaaccccgatgtcgacgcgaagacccatgag
aagatcgcgaccggcaagtccgagaacaagttcggcattcccatcgcccgcgcccgcgag
gtctatgcccgtgccgccgcgatgccggggctcgatgtgctgggcatcgacgtccatatc
ggcagccagctgaccgagcttgaccccttcgagctggcctatggcaaggtcgcagagctg
acgaagctgctgcgcgccgacggccacgacatccgccggctcgatctgggcggggggctc
ggcattccctatgagcgctcgaatgccgcgccgccgctgccggtcgaatacggcgccatg
gtcaggcgcgtgctgggcgatctcgatgtcgagatcgagatcgagcccgggcggctcatc
gccgggaatgcgggcgttctggtcagccgggtgatctatgtgaaagagggcgaggggcgg
accttcctgatcctcgatgcggcgatgaacgatctggtccggccctcgatgtatggcgcc
tggcacgacatcgtgccgctgaacgaacccgccgccgggatcggttatgccccccatgat
gtcgtcggcccggtctgcgagaccggcgacaccttcgccaaggcgcgcgatctgccgccg
atggccgagggcgatctggtcgccttccgctcggccggggcctacggcgcggtgatggcg
tcggaatacaacacccggcccctggtgcccgaggtgctggtcagcggagatcacttcgcc
gtcattcgccagcggccctcctttgacgagatcataaaccgcgataccatcccggaatgg
ttgtga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (10)   
   KEGG PATHWAY (6)   
   KEGG MODULE (4)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (25)   

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