KEGG   Rhodovulum sp. MB263: B5V46_12765
Entry
B5V46_12765       CDS       T04771                                 
Name
(GenBank) DNA helicase II
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
rhm  Rhodovulum sp. MB263
Pathway
rhm03420  Nucleotide excision repair
rhm03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:rhm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    B5V46_12765
   03430 Mismatch repair
    B5V46_12765
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rhm03400]
    B5V46_12765
Enzymes [BR:rhm01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     B5V46_12765
DNA repair and recombination proteins [BR:rhm03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     B5V46_12765
   MMR (mismatch excision repair)
    Other MMR factors
     B5V46_12765
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_30 PcrA_UvrD_tudor AAA_11
Other DBs
NCBI-ProteinID: ARC89418
UniProt: A0A1V0HZU4
Position
complement(2741222..2743681)
AA seq 819 aa
MCPIDDSDAFETAAEAPLSVRASVRGMAARAAPYLDGLNPAQRQAVETLDGPVLMLAGAG
TGKTRALTARIAHLLCTGAARPNEILAVTFTNKAAREMKERVGRLMGETVEGMPWLGTFH
AICVRLLRRHAELVGLKSNFTILDTDDQIRLLKQVIAAANIDEKRWPARQLAGLIDHWKN
RAWTPETVPASESSGFDGRGVRLYAAYQDRLKTLNAADFGDLLLHVVTIFQAHPDLLEQY
RRWFRYIMVDEYQDTNVAQYLWLRLLAGGHRNICCVGDDDQSIYGWRGAEVGNILRFEKD
FPGAAVIRLEQNYRSTPHILAAASGLIAANKGRLGKTLWTEAEAGEKVRLIGHWDGEEEA
RWIGEEAETLQGGSRGMRPFSLDDMAILVRASHQMRAFEDRFLTIGLPYRVIGGPRFYER
MEIRDAMAYFRLAVSPADDLAFERIVNTPKRGLGDKARQKIQAMARAEGVPLVEGARMLL
ESGGLGGKGGAELRRLIEAIWRWHGEVLDTAPTVVAGDDAMLIDDEAVPLEAGQGALSHV
GLAERILDEAGYTAMWQADKTPEAPGRLENLKELVKALEEFDNLQGFLEHVALIMDNDSE
ATGAKISVMTLHAAKGLEFPVVFLPGWEDGLFPSQRAMDETGLKGLEEERRLGYVGLTRA
EELCTVSFAANRRVYGKWQSQLPSRFIDELPAAHVEVLTPPGLYGGGYGAAAPQVAVSDI
EARASRADVYNSPGWQRLQSRTAGRSGSTPSHGARGITIDAEALPAFELGARVFHQKFGY
GTVTGIEGDKLDIAFDKAGAKKVVARFVVAAASAGDVPF
NT seq 2460 nt   +upstreamnt  +downstreamnt
atgtgcccgatcgacgactccgacgctttcgaaaccgccgctgaggcgcccctttccgtt
cgtgcctccgttcgcggcatggccgcgcgcgcggcgccctatctcgacgggctgaacccg
gcgcagcgccaggcggtcgagactctggacggcccggtcctgatgctggcgggcgcgggc
accggcaagacccgggcgctgaccgcgcggatcgcgcatctgctctgcaccggcgcggcc
cggccgaacgagatcctggcggtgaccttcaccaacaaggccgcgcgcgagatgaaggag
cgggtcgggcggctgatgggcgagaccgtcgagggcatgccctggctcggcaccttccat
gcgatctgcgtccggcttctgcgccgccatgccgagctggtggggctcaagtcgaatttc
accatcctcgataccgacgaccagatccggctgctgaaacaggtgatcgcggccgcgaat
atcgacgagaaacgctggcccgcgcggcagctggccgggctgatcgaccactggaagaac
cgcgcctggacccccgagaccgtgccggcctcggaaagctcgggcttcgatggccggggc
gtcaggctctatgccgcctatcaggaccgtctgaagaccctgaacgcggccgatttcggc
gatctgctgctgcatgtggtgaccatattccaggcccatcccgaccttctggagcagtac
cggcgctggttccgctatatcatggtcgacgaataccaggacaccaacgtggcgcagtat
ctgtggctgcggcttctggcgggcgggcacaggaacatctgctgcgtcggcgacgacgat
cagtcgatctatggctggcgcggcgccgaggtcggcaacatcctgcgcttcgagaaggat
tttcccggcgccgcggtgatccggctggaacagaattaccgctcgaccccgcatatcctc
gccgccgcctcggggctgatcgcggccaacaaggggcggcttggcaagacgctctggacc
gaggccgaggcgggcgagaaggtccggctgatcggtcactgggatggcgaggaagaggcc
cgctggatcggcgaggaggctgagacgctgcagggcggcagccgcgggatgcggcccttc
tcgctggatgacatggcgattctcgtgcgcgccagccaccagatgcgtgccttcgaggat
cgtttcctgaccatcggtctgccgtaccgggtgatcggcgggccgcgtttctacgagcgg
atggagatccgcgatgcgatggcctatttccgcctcgccgtcagccccgccgacgatctg
gccttcgagcggatcgtgaacacccccaagcgcggcctcggcgacaaggcccggcagaag
atccaggccatggcccgggccgaaggcgtgccgctggtcgagggtgcccggatgctgctg
gaaagcggcgggctaggcggcaagggcggggccgagctgcgcaggctgatcgaggcgatc
tggcgctggcatggcgaggtgctggacacggcgccgacggtggtggcgggcgacgacgcc
atgctgatcgacgacgaggccgtgccgctggaggcggggcagggggctctgagccatgtc
gggctggccgagcgcattctggatgaggcgggctacacggcgatgtggcaggccgacaag
acgcccgaggcgccggggcggctggagaacctcaaggaactggtcaaggcgctggaggaa
ttcgacaatcttcagggctttctcgaacatgtcgcgctgatcatggacaatgacagcgag
gcgaccggggccaagatctcggtgatgacgctgcatgccgccaaggggctggaatttccg
gtggtgttcctgccgggctgggaggacgggcttttccccagtcagcgcgcaatggacgag
accgggctgaaggggctcgaggaggaacggcggcttggctatgtcgggctgacccgggcc
gaagagctttgcaccgtgtccttcgccgccaatcgccgggtctacgggaaatggcagtcg
caactgccctcgcgcttcatcgacgagcttcccgctgcccatgtcgaggtgctgacgcct
cccggactgtatggcgggggctatggcgcggcggcgccgcaggtggcggtctcggatatc
gaggcgcgggcctcgcgcgccgatgtctataattcgccgggctggcagcggctgcaaagc
cgcaccgccggtcggtcaggctccacgccgtcgcacggcgcccgtggcatcacgatcgat
gccgaggcgctgccggccttcgagctcggtgcgcgggtgttccaccagaaattcggctat
ggcacggtgaccgggatcgagggcgacaagctcgacatcgccttcgacaaggccggggcc
aagaaggtcgtggcccggttcgtggtggcggccgccagtgccggcgatgttcccttctag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (18)   

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