KEGG   Rhizobium sp. N1341: AMJ98_CH01425
Entry
AMJ98_CH01425     CDS       T04420                                 
Symbol
rpoZ
Name
(GenBank) DNA-directed RNA polymerase subunit omega
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
rhn  Rhizobium sp. N1341
Pathway
rhn03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:rhn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    AMJ98_CH01425 (rpoZ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rhn03021]
    AMJ98_CH01425 (rpoZ)
   03400 DNA repair and recombination proteins [BR:rhn03400]
    AMJ98_CH01425 (rpoZ)
Enzymes [BR:rhn01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     AMJ98_CH01425 (rpoZ)
Transcription machinery [BR:rhn03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     AMJ98_CH01425 (rpoZ)
DNA repair and recombination proteins [BR:rhn03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      AMJ98_CH01425 (rpoZ)
SSDB
Motif
Pfam: RNA_pol_Rpb6 MinE
Other DBs
NCBI-ProteinID: ANL09134
Position
1449533..1449937
AA seq 134 aa
MARVTVEDCIDKVENRFELVLLASHRARLISQGASITIDRDNDKNPVVALREIADETLSP
DDLKEDLIHSLQKHVEVDEPEPDPASMIAAGGAAAADSEEQDDLPETITFDQMSEEELLA
GIEGLVPPEKSDDY
NT seq 405 nt   +upstreamnt  +downstreamnt
atggcccgtgtcacagttgaagattgcattgacaaggtggagaaccgcttcgagctggtt
ctgctcgccagccaccgcgcccggctgatttcccagggtgcctcgatcaccatcgatcgc
gacaacgacaagaatcctgtcgtggcgctgcgcgaaatcgccgacgagacgctttcgccc
gatgatctcaaggaagatctgatccattcgctgcagaagcatgtcgaagtcgacgagccc
gagcccgatccggccagcatgatcgccgccggcggcgctgctgccgctgacagcgaggag
caggacgacctgccggagacgatcactttcgaccagatgtcggaagaagagctgcttgcc
ggtatcgagggcctcgtgccgccggaaaagagcgacgattattaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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