KEGG   Rhizobium sp. N1341: AMJ98_CH03128
Entry
AMJ98_CH03128     CDS       T04420                                 
Name
(GenBank) uracil-DNA glycosylase-like protein
  KO
K21929  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
rhn  Rhizobium sp. N1341
Pathway
rhn03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:rhn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    AMJ98_CH03128
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rhn03400]
    AMJ98_CH03128
Enzymes [BR:rhn01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     AMJ98_CH03128
DNA repair and recombination proteins [BR:rhn03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     AMJ98_CH03128
SSDB
Motif
Pfam: DUF4130 UDG DUF2026
Other DBs
NCBI-ProteinID: ANL10762
Position
complement(3160783..3162237)
AA seq 484 aa
MRRVVLAGRGELGEWRDAARALAAAGILPEEIDWREKSTEADLSFQRDAMPPEPATSRKP
MTVPPAFIELAETVLCHSDPARFSLLYHLLWRLQLDRQLLEVTSDEDVVRARLMAKNVRR
DAHKMTAFVRFKEVGAVSAGRRKFLAWFEPDHHIVRRTAPFFQRRFTDMDWLIATPKGSA
AWDGERLTIADEPCERLNLSDATDELWRTYYASIFNPARLKVKAMQAEMPKKYWKNLPEA
DLIPGLIASAESKVRDMAAREATQSLPFHDRLQQAARNFPAEPEAPVGALEALRAEAAVC
TRCPLHANATQTVFGEGPGDAEVMFVGEQPGDQEDIAGRPFVGPAGRLLDQVIAEAGIDR
SRLYVTNAVKHFKYEPRGKRRIHQKPNMGEVKHCRWWLDLEMELVKPKLIVAMGATALAA
LTDVKQRLQDIRGRAMAIEGGRTLFVTVHPSYLLRIPDERLKAEEMVRFREDILEIQRLM
TEVG
NT seq 1455 nt   +upstreamnt  +downstreamnt
atgcgccgggtcgtgcttgcgggacggggagagcttggcgaatggcgcgatgccgcacgc
gccctggcggccgccggcatcttgcccgaggagatcgactggcgcgaaaaaagcaccgag
gccgatctttcgtttcaacgtgacgccatgccgccggagcctgcgacatcacgcaagccg
atgacggtgccgcccgccttcatcgagcttgcggagacggttctctgccattccgatccg
gcgcggttttcgctgctttaccatctgctctggcggctgcagctggaccggcagctgctt
gaggtgacctccgacgaggatgtcgtgcgtgccaggctgatggcgaagaacgttcggcgt
gacgcgcacaaaatgacggcgttcgtccgcttcaaggaggttggcgcggtatcggcaggt
cgtcggaaattcctcgcctggttcgagccggaccatcatatcgtcaggcgcacggctccc
tttttccaacgccgtttcaccgacatggactggctgattgcgacgcccaagggctcggcg
gcctgggacggcgagcggctgacgattgccgacgagccatgcgaaaggctcaatctcagc
gatgccacggacgaactctggcgcacctactatgccagcatcttcaacccggcgcgattg
aaggtgaaggcgatgcaggcggagatgccgaagaaatactggaagaacctgccggaagcc
gatctcattcccggcttgatcgcatcggccgagagcaaggtgcgcgacatggcggcgcgg
gaagcgacgcaatcgctgccttttcacgaccgcttgcagcaggccgcgcgaaattttccc
gcagaaccggaggctccggtgggcgcactcgaagcgctgcgcgcggaggctgcggtctgc
acgcgctgtccgcttcacgccaatgcgacccagacggtattcggagaggggccgggcgat
gcggaggtgatgtttgtcggcgagcagccgggcgaccaggaggatattgccggccgcccc
ttcgtcggtccggccggccggttgctcgaccaggtgatagcagaggcgggtatcgaccgc
tcaaggctctatgtcaccaatgccgtcaagcatttcaaatatgagccgcgcggcaagcgc
cgcatccaccagaagcccaatatgggcgaggtgaagcattgccgctggtggctcgatctg
gaaatggaactggtcaagccgaagctgatcgtcgccatgggggcgacggcgcttgcggcg
ctgaccgatgtgaagcagcgtctccaggatatcaggggaagagcgatggcgatcgaaggc
gggcggacgctgttcgtgacggtgcatccgtcctatctgctgcgtattcccgacgagcgg
ctgaaggcggaggaaatggtacggtttcgcgaggacatactggaaattcagcggcttatg
acggaagtcggataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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