KEGG   Roseburia hominis: RHOM_05980
Entry
RHOM_05980        CDS       T01621                                 
Name
(GenBank) ECF subfamily RNA polymerase sigma-24 factor
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
rho  Roseburia hominis
Brite
KEGG Orthology (KO) [BR:rho00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rho03021]
    RHOM_05980
Transcription machinery [BR:rho03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     RHOM_05980
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r4 Sigma70_r2 DUF4835 Sigma70_ECF Sld3_N DUF134
Other DBs
NCBI-ProteinID: AEN96315
UniProt: G2SWN1
Position
1312524..1313021
AA seq 165 aa
MFFSGKNHKEQKIEQLLLENYNKYYRLAYSYVHHEADAADIVQNGAYKAIKNSDALKQEE
YAQTWIYRIMLNEIFGYVKKNREVSLDEMPAEEGREDRYENIDLRRALDAMEERDKAVIE
LRYFEDMKLEDIARVLGENQNTVKSRLYRGLKKLRLELTDTWQWE
NT seq 498 nt   +upstreamnt  +downstreamnt
atgtttttctccgggaaaaaccataaggaacaaaagatagaacagcttttgctggaaaat
tacaacaaatactatcgtcttgcctacagttacgtacatcatgaggcggatgccgcggat
atcgtacagaacggagcgtacaaggcgatcaaaaacagcgatgcgctaaagcaggaggaa
tatgcgcagacatggatttaccgcattatgttaaacgagatcttcggatatgtaaaaaag
aaccgggaagtttccctggatgagatgccggcggaagagggaagagaagaccgctatgag
aacattgatctaagaagggcattggacgccatggaagaacgggataaagcggtcattgaa
ctgcgctattttgaggacatgaagctggaggatattgcgcgcgtgctgggggagaaccag
aatacggtaaagagccggctgtaccgcggattaaagaagctacggctggaacttacggat
acatggcagtgggaatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (56)   
   KEGG ORTHOLOGY (1)   
   RefGene (53)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (67)   

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