KEGG   Roseburia hominis: RHOM_09670
Entry
RHOM_09670        CDS       T01621                                 
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing)
  KO
K02469  DNA gyrase subunit A [EC:5.6.2.2]
Organism
rho  Roseburia hominis
Brite
KEGG Orthology (KO) [BR:rho00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rho03032]
    RHOM_09670
   03400 DNA repair and recombination proteins [BR:rho03400]
    RHOM_09670
Enzymes [BR:rho01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     RHOM_09670
DNA replication proteins [BR:rho03032]
 Prokaryotic type
  DNA Topoisomerases
   RHOM_09670
DNA repair and recombination proteins [BR:rho03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      RHOM_09670
SSDB
Motif
Pfam: DNA_topoisoIV DNA_gyraseA_C ThiS Ribosomal_L30_N
Other DBs
NCBI-ProteinID: AEN97045
UniProt: G2SXD1
Position
complement(2102301..2104550)
AA seq 749 aa
MRITMKQEEQIIRTEYSELMQKSYIDYAMSVIISRALPDIRDGLKPVQRRTLYDMYELGI
RYDKPYRKSARIVGDTMGKYHPHGDSSIYGALVVLAQDFKMGQTLVDGHGNFGSIEGDGA
AAMRYTEARLQKLTQEAFLADLDKDVVDFVPNFDETEKEPEVLPVKVPNLLINGAEGIAV
GMTTSIPTHNFGEVIDGVIAYMKNPDINTEQMMQYIPGPDFPTGGVIANKDELTAIYSTG
VGKIKIRGKVEVEQVKGGKERLVITEIPYTMIGANIGKFLNDVYSLVETKKTNDIVDITN
QSSKEGIRIVIELRKGADAANLENLLYKKTKLEDTFGVNMLAVVDGRPETMGIVPIIRHH
VNFQYELAKRKYTTLLAKELEKKEVQEGLIHACDVIDLIIEILRGSANVKMARACLTEGI
IEGIAFKSAQSQKDAQSLRFTERQADAILEMRLYKLIGLEIEALMKEHEKTLANIAEYNE
ILSNRAAMAKVIIRELEAYKKEYGRPRRTVIDNLKEAVVEEKKIEEMDVVFLMDRFGYAK
TIDVAAYERNREAADAENRYVLTCKNTDKICIFTNKGQMHLLKVLDLPFGKFRDKGTPID
NLSNYNSSEENFVYITNLGAICNHRLIFGTKTAMLKIVDGSEFDVAKRTTAATKLTDGDE
VLFVHPVAGNETIVMQSERDFFLRIAVDTIPEKKKGAVGVRGMRLADGDALTAIHLLGEG
ESAQTEVKGKPVMLNRLHVAGRDTKGTKK
NT seq 2250 nt   +upstreamnt  +downstreamnt
atgaggattaccatgaaacaggaagaacagattatccgcaccgagtattcggagctgatg
cagaaatcctatatcgactatgcaatgagcgtgattatctcacgtgcactgccggatatc
agggatgggttaaagccggtacagaggcggacactttatgatatgtatgaactcggcatc
cgctatgacaagccgtaccgtaagagtgcgcgtattgtcggggataccatgggtaagtat
cacccgcacggagacagttcgatctacggtgcgttggtggtgctggcacaggattttaaa
atgggacagacgctggtggacggacacggcaacttcggctccatcgagggagacggagcg
gctgccatgcgttacacggaggcgagacttcagaagctgacgcaggaggcgttcttagca
gaccttgacaaggatgtcgtggattttgtgccgaactttgacgagacggagaaagagccg
gaggttctgccggtaaaggtgccgaatcttctgatcaacggtgcggagggaattgcggtt
ggcatgacgacgagcattccgacgcacaatttcggcgaggtcattgacggtgtgattgcc
tatatgaagaatccggacatcaacaccgagcagatgatgcagtatatcccgggaccggat
tttccgaccggcggtgtgatcgccaacaaggacgagttgacagccatctactccacaggc
gtggggaagatcaagatccgcggaaaagtggaggttgagcaggtcaaaggcggaaaggaa
cgcctggtaattaccgagattccgtatacgatgatcggtgcaaatatcggaaagttctta
aacgatgtctacagcctcgtggagacgaagaagacgaatgacattgtggatatcacaaac
cagtcctccaaggagggcatccgcattgtcatcgagctgcgcaagggagcggacgctgcc
aatctggagaatctattatataagaagaccaagcttgaggacacgttcggtgtcaatatg
cttgcggtggtagacggaagaccggagacgatgggaattgtgccgatcatacgtcatcat
gtgaatttccagtatgagctggcaaagagaaagtatacaacgctgcttgccaaggagctg
gagaagaaggaagtgcaggagggattgatccacgcctgcgatgtgatcgatcttatcatc
gagatcctgcgcggcagtgcgaacgtcaagatggcgagagcctgtctgaccgagggaatc
atcgaggggattgcctttaagtcggcgcagtcccaaaaggacgcgcagagcctgcgtttt
acggagcgccaggcggatgccatcttagagatgcgtctgtacaagctgatcggactcgag
atcgaggcgctgatgaaagagcacgagaagacgcttgccaatattgcggagtacaatgag
atcttaagcaaccgtgcggcgatggcaaaggtgattatccgcgagctggaagcttacaaa
aaggagtatggcagaccgcggcgcactgtcattgacaatctcaaagaggcggttgtcgag
gagaagaagattgaggagatggacgtggtattcctgatggatcgctttggctacgcgaag
acgatcgacgtggcggcgtatgaacgcaaccgcgaggcggccgatgcggagaaccgctat
gtgctgacctgtaagaataccgataagatctgcatttttacgaacaagggacagatgcat
ctgctcaaggtgctggatctgccattcggcaagttccgcgacaagggaacgccgattgac
aatctgagcaattataacagcagtgaggagaactttgtctatatcacgaatctgggagcg
atctgcaaccacaggctgatctttggcacgaagacggcgatgcttaagattgtggacgga
agcgagtttgacgttgcaaagcgcacgaccgcggcgacgaagcttaccgacggggacgag
gtgcttttcgtgcatccggttgccgggaatgagacgatcgtcatgcagtccgagcgcgat
ttcttccttcggattgcggtggataccattccggagaagaaaaagggtgcggtcggcgtc
cgcggcatgcggcttgcggacggagatgcgcttactgcgattcatctgctcggcgagggt
gagagcgcccagacggaggtaaaaggaaagcctgtgatgttaaaccggctgcatgtggcg
ggccgcgacacgaaaggaacgaagaaataa

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (88)   
   KEGG ORTHOLOGY (1)   
   RefGene (85)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (99)   

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