KEGG   Roseburia hominis: RHOM_09800
Entry
RHOM_09800        CDS       T01621                                 
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
rho  Roseburia hominis
Pathway
rho02024  Quorum sensing
rho03060  Protein export
rho03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:rho00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    RHOM_09800
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    RHOM_09800
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    RHOM_09800
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:rho02044]
    RHOM_09800
Enzymes [BR:rho01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     RHOM_09800
Secretion system [BR:rho02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   RHOM_09800
  Eukaryotic Sec-SRP protein
   RHOM_09800
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N CbiA Zeta_toxin cobW APS_kinase KTI12 AAA_33 AAA_17 AAA_22 ParA AAA_31 MeaB AAA_30 VirC1 ArsA_ATPase nSTAND3 AAA_18 AAA_24 MobB ResIII Thymidylate_kin ABC_tran TrwB_AAD_bind AAA_28 AAA VapE-like_dom TctA AAA_14 SLFN-g3_helicase PRK YqeC NTPase_1 Arf
Other DBs
NCBI-ProteinID: AEN97071
UniProt: G2SXN4
Position
complement(2129151..2130509)
AA seq 452 aa
MAFDSLSEKLQNVFKNLRSKGRLTEADVKTALKEVKMALLEADVNFKVVKQFVKDVEERA
VGQDVMNGLNPGQMVIKIVNEEMVKLMGSETAEITLQPGKAVTVIMMTGLQGAGKTTTAA
KLAGKFKQKGKKVLLVAGDVYRPAAIEQLQINGQKQGVEVFSMGDKNSPVNIAKAAMEHA
AKNDFNIVIIDTAGRLHIDEDMMAELIQIKENVTVHQTVLVVDAMTGQDAVNVAKTFDER
IGIDGVILTKLDGDTRGGAALSIRAVTGKPIFYAGMGEKLSDLEQFYPDRMASRILGMGD
VLTLIEKAQEDFDEERAKKIEQKMRKNEFDFEMYLESMSQMKKMGGLSSILGMMPGLGMG
AGKMPDIDEAAAEKSLSRTEAIIYSMTPEERQNPSLLNPSRKRRIAVGAGVDIAEVNRLV
KQFEQMKKMMKQMPGMMKKGRRGGGMFGKLPF
NT seq 1359 nt   +upstreamnt  +downstreamnt
atggcatttgacagcttatctgaaaaacttcaaaatgtattcaagaacctgcgcagcaag
ggacggctgacggaagcggatgtcaagacagcgcttaaggaagtcaagatggcgctctta
gaggcggatgtcaacttcaaggtcgtcaagcagttcgtcaaggacgtggaggagcgtgcc
gtcggacaggacgtgatgaacggactgaacccggggcagatggtcatcaagattgtaaac
gaagagatggtcaagctgatgggctcggagacagccgagatcacactgcagcccggcaag
gcagttaccgtcatcatgatgaccggtcttcagggagcaggtaagacgaccacagcagca
aagcttgccggaaagttcaagcagaaaggcaagaaggtacttctcgtggcaggcgatgtc
tatcggccggcagcgatcgaacagttacagatcaacggacagaagcagggcgtggaagta
ttttccatgggcgataagaacagcccggtgaacattgcaaaagcggcgatggaacatgcc
gcgaagaacgattttaacatcgttatcatcgatactgccggacgtcttcacatcgatgaa
gatatgatggcagagttgattcagataaaagaaaatgtcacagtgcatcagaccgtcctt
gtggtggacgccatgacaggacaggatgcggtgaatgtggcgaagacctttgatgagcgc
atcggtatcgacggagtcattctgacaaagctcgacggtgataccagaggcggtgcggcg
ctttccatccgggcagtgaccggtaagccgattttttatgcgggtatgggagagaagctt
tcggatctggagcagttttacccggatcgcatggcatcgcgtattctcggtatgggcgat
gtgctgaccctcatcgaaaaagcccaggaggactttgacgaggagcgggcgaagaagatt
gagcagaagatgcgcaagaacgaatttgactttgagatgtatctggagtcgatgagtcag
atgaagaagatgggcggtctgtccagtatcctcggtatgatgccgggactcgggatgggc
gcaggcaagatgccggatattgacgaggcagcagccgagaagagcttatcgcgcacggag
gcgatcatctattccatgacgccggaggagagacagaatccttcccttttgaatccgagc
aggaagcgccgtattgcggtgggagccggtgtcgatattgcggaggtcaaccgtctggtg
aagcagtttgaacagatgaagaagatgatgaagcagatgcctggcatgatgaagaagggc
agacgcggtggtggaatgttcggcaagcttccgttttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (44)   
   KEGG ORTHOLOGY (1)   
   RefGene (41)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (35)   
   Pfam (35)   
All databases (88)   

Download RDF
DBGET integrated database retrieval system