KEGG   Roseburia hominis: RHOM_13690
Entry
RHOM_13690        CDS       T01621                                 
Name
(GenBank) plasmid transfer factor-related protein
  KO
K03205  type IV secretion system protein VirD4 [EC:7.4.2.8]
Organism
rho  Roseburia hominis
Pathway
rho03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:rho00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    RHOM_13690
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:rho02044]
    RHOM_13690
Enzymes [BR:rho01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     RHOM_13690
Secretion system [BR:rho02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   RHOM_13690
SSDB
Motif
Pfam: T4SS-DNA_transf TraG-D_C TrwB_AAD_bind DEAD
Other DBs
NCBI-ProteinID: AEN97844
UniProt: G2T5J6
Position
complement(2964608..2966461)
AA seq 617 aa
MKNDSIKKYLIPNIPYLFVLWAFLKLGTAYRLAAGADFAHKLMGLGQTIGPAFADFAPGL
APFDWLVGIVGAVAFRVMVYVKSKNAKKFRRDEEYGSARWGCPKDIAPFVDPKFENNIIL
TGTEFLTMNTRPKNPANARNLNACVIGSSGSGKTRFWLTPQILQASADKNGGCSYVCVDP
KGGVLGQVGHFLQKRGYRIKVFNSIDFTKSMHYNPLAYIRNEADILKFVDALISNTKGEG
KEGDPFWTKSETLLYCALIAYIIFEGPAEDRNMNTLVDMISGMEVKEDDEDFMNAVDYMF
AGLEKRKPDCFAVKQYKKYKLASGKTAKSILISCGARLAPFDIPQLREVMAYDELELDRI
GDRKTAVFFIISDTTQTYNFLVALAFSQMFNLLCERADNVHGGRLPHHVRVLWDEAANTG
QVPQLEKIVAVIRSREISLTLFYQQLAQCKAIYDKHAETILGNMDSVIFLGGREASTIKE
ISENWLGKATISMQTDSRSRGQSESYSQNNQRLGRELMTPSELATMPGDKCILQLRGLPP
FYSPKYDLKKHPNYRYTAEADKKKNAFDLDRLINRRRRPGPDELCEVYAVAVPDDGLTSE
DEDILNYDDIDDPDAFA
NT seq 1854 nt   +upstreamnt  +downstreamnt
gtgaagaacgatagcatcaaaaaataccttattcccaacatcccgtatctgtttgtcctg
tgggcctttctcaagctggggacggcctaccgtctggcggcgggtgcggattttgctcat
aagctcatggggctgggccagaccattggcccggcctttgccgactttgccccggggctt
gctccctttgactggctcgttggcattgtgggggctgtggcgttccgggtaatggtctat
gtgaaaagtaaaaacgctaaaaaatttcggcgggatgaggagtatggatcagcccgttgg
ggctgtccgaaagatatagcccctttcgtagatccaaagtttgaaaacaacatcattctg
accgggacggagttccttaccatgaatacccgtccgaaaaatccggccaacgcccgcaac
ctcaatgcctgtgtgatcggttcgtccggctccggcaaaacccggttctggcttaccccg
cagattttgcaggccagcgcagacaaaaacggcggatgcagctatgtgtgtgtcgatccc
aaaggaggcgttctcgggcaggtgggccacttcctgcaaaagcgtgggtatcggatcaag
gtgttcaattccattgatttcacaaaatccatgcactataacccgctggcgtacatccgc
aacgaggccgacatccttaaatttgtggacgctctcatttccaacacaaaaggcgaaggc
aaggaaggcgatccattctggacaaaatcggaaaccctgctttactgcgccctcatcgcc
tatatcatttttgagggccccgccgaggatcggaacatgaacacattggttgacatgatt
tccgggatggaggtcaaggaggatgacgaggattttatgaacgccgtggactatatgttt
gcgggcctggaaaaacgaaagccggattgctttgcggtcaagcagtataaaaagtacaaa
ctggccagcggcaaaacagcaaagtcgatccttatttcctgcggtgcaaggctggctccc
tttgacatcccccagcttagggaggtcatggcctatgacgagctggagcttgaccgcatc
ggggatcgaaaaacggcggtgttctttatcatctcggacactacgcaaacctataatttc
cttgtggctctggccttttcgcagatgttcaatctgctgtgcgagagggccgacaatgtt
cacggaggccgcctgccccatcatgtacgggtgctgtgggacgaggccgccaacacaggg
caggttccccagcttgaaaagatcgtggctgtcatccgttcccgtgagatcagcttaacg
ctgttctatcagcagttggcgcagtgtaaggcgatttacgataaacacgccgaaaccatt
ttgggaaatatggacagcgtgatattcctcgggggccgggaggccagcaccatcaaggaa
atatccgagaactggctgggtaaggctacaatctccatgcagaccgacagccgctcccgt
ggccagtcggaaagctacagccaaaataaccagcggctgggccgggagctgatgacaccc
agcgaactggcgaccatgcccggggataagtgtattttacagcttcggggcctgcccccg
ttctattccccaaaatacgatttgaaaaagcacccgaactaccgatatacggctgaagcc
gacaaaaagaaaaacgcctttgaccttgaccggctcattaaccgccgcaggcggcccggg
ccggacgagctgtgtgaggtgtatgccgtggctgtgccggacgatgggctcacaagcgag
gacgaggacatcctcaattatgatgacatcgacgatccggacgcctttgcataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (72)   
   KEGG ORTHOLOGY (1)   
   RefGene (69)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (83)   

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