KEGG   Rhodocytophaga rosea: GXP67_15450
Entry
GXP67_15450       CDS       T06412                                 
Name
(GenBank) hypothetical protein
  KO
K01975  RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
Organism
rhoz  Rhodocytophaga rosea
Brite
KEGG Orthology (KO) [BR:rhoz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:rhoz03016]
    GXP67_15450
Enzymes [BR:rhoz01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.4  Phosphoric-diester hydrolases
    3.1.4.58  RNA 2',3'-cyclic 3'-phosphodiesterase
     GXP67_15450
Transfer RNA biogenesis [BR:rhoz03016]
 Prokaryotic type
  tRNA spricing factors
   Other tRNA splicing factors
    GXP67_15450
SSDB
Motif
Pfam: LigT_PEase 2_5_RNA_ligase2
Other DBs
NCBI-ProteinID: QHT67934
UniProt: A0A6C0GJF2
Position
3709598..3709882
AA seq 94 aa
MTEKRIFVGIPSPDELAQPLAACRNALHQPELAWVSTENLHITLLFMGNISCGEIDNIAG
KLASLVTFPSFCLCFSEVQVIKRGGKSQYDLGSF
NT seq 285 nt   +upstreamnt  +downstreamnt
atgacagaaaagcgtatatttgtaggtattccttcgccagatgagttagctcaaccactg
gcggcttgccgtaatgccttacatcaacctgaactagcctgggtgagtacagaaaatctg
catatcaccttactgtttatgggtaatatatcatgtggagaaatagataatattgccgga
aaacttgcgtcactggttacctttccaagcttctgtttgtgcttttcagaagtgcaggtt
attaagcgaggggggaaaagccaatatgatctgggcagcttttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

Download RDF
DBGET integrated database retrieval system