KEGG   Rhodobacter sp. LPB0142: LPB142_01105
Entry
LPB142_01105      CDS       T04631                                 
Name
(GenBank) tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
  KO
K03650  tRNA modification GTPase [EC:3.6.-.-]
Organism
rhp  Rhodobacter sp. LPB0142
Brite
KEGG Orthology (KO) [BR:rhp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:rhp03016]
    LPB142_01105
Transfer RNA biogenesis [BR:rhp03016]
 Eukaryotic type
  tRNA modification factors
   Other tRNA modification factors
    LPB142_01105
 Prokaryotic type
   Methyltransferases
    LPB142_01105
SSDB
Motif
Pfam: MnmE_helical TrmE_N MMR_HSR1 FeoB_N Dynamin_N ABC_tran AAA_29 RsgA_GTPase AIG1 AAA_28 ABC_ATPase TniB GBP
Other DBs
NCBI-ProteinID: AOZ68083
UniProt: A0A1D9M8B6
Position
complement(214165..215448)
AA seq 427 aa
MDTIFALATARGKAGVAVIRISGPRAFAAAESLAGRLPAPRRAGLRHLRLGAEALDEAVV
LCFEAGASFTGEEVAELHLHGAVATVSVVLRALGAVEGLRLAEPGEFTRRALENGRLDLA
QVEGLSDLIEAETEAQRKQALRVLSGAVGEVVEAWRAKLVRAAALIEATIDFADEEVPVD
VSPEVLELIGEVSGAVRAEIGRLGAAERIREGFEVAIVGRPNAGKSTLLNALAGREAAIT
SEIAGTTRDVIEVRMDLGGLAVTLLDTAGLRETEDVVEAIGVERAVSRAEAADLRIFLLD
REEIPLIAPRDGDLLVQGKADLHPAEGLAISGKTGAGVDALVAAVTERLTERAAGAGVMS
RERHREALARAIRSLESARDEVLRGGERAELAAEGLRQAARALESLVGRVDVEHLLDEIF
ASFCIGK
NT seq 1284 nt   +upstreamnt  +downstreamnt
atggacacgatctttgccctggccacggcccgcggaaaggcgggcgtggcggtcattcgc
atttccgggccgcgggcctttgcggcggccgagagcctggccgggcggctgcccgcgccg
cgcagggcggggctgcggcatctgcggctcggggcggaggcgctcgacgaggcggtggtg
ttgtgcttcgaggcgggggcgagtttcaccggcgaggaagtggcggagctgcatctccat
ggcgcggtggcgacggtttcggttgttttgcgggctttgggcgcggttgaggggctgcgg
ctggcggagccgggcgagttcacgcggcgggcgttggagaacgggcggctcgatcttgcg
caggtcgaggggctttccgatctgatcgaggcggagaccgaggcgcagcgcaagcaggcg
ttgcgggtgttgtcgggcgcggtgggcgaggttgtcgaggcgtggcgggcgaagctcgtg
cgggcggcggcgctgatcgaggcgacgatcgattttgccgatgaagaggtgccggtcgat
gtttcgcccgaggttctcgagctgattggcgaggtttcgggcgcggtgcgggcggagatc
ggccggctcggcgctgcggagcggatccgtgaggggttcgaggtggcgattgtcgggcgg
ccgaacgcggggaaatcgacgctcttgaacgcgctggcggggcgcgaggcggcgatcacc
tcggagattgcggggacgacgcgcgatgtgatcgaggtgcggatggatctcggcgggctg
gcggtgacgctgctggataccgcggggctgcgcgagaccgaggatgtcgtcgaggcgatc
ggggtggagcgcgcggtgagccgggcggaggccgccgatctgcggattttcctgctcgat
cgggaggagatcccgctgattgcgccgcgggacggtgatcttctcgtgcagggcaaggcc
gatttgcacccggccgaggggctcgcgatctccgggaaaaccggcgcgggggtcgatgcg
ctggtggcggcggtgaccgagcggctgaccgagcgggcggcgggcgcgggcgtgatgtcg
cgtgagcggcaccgcgaggcgcttgcgcgggcgattcggtctttggaatcggcgcgggat
gaggtattgcgcgggggtgagcgggccgagctcgccgcggagggcttgcgccaggccgcg
cgcgcgttggagtcgcttgtggggcgggtggatgttgagcatctgctcgacgagattttc
gccagtttctgcatcggcaagtaa

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Ontology (2)   
   KEGG BRITE (2)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (13)   
   Pfam (13)   
All databases (29)   

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