KEGG   Rhodobacter sp. LPB0142: LPB142_02200
Entry
LPB142_02200      CDS       T04631                                 
Name
(GenBank) RNA pseudouridine synthase
  KO
K06177  tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
Organism
rhp  Rhodobacter sp. LPB0142
Brite
KEGG Orthology (KO) [BR:rhp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:rhp03009]
    LPB142_02200
   03016 Transfer RNA biogenesis [BR:rhp03016]
    LPB142_02200
Enzymes [BR:rhp01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.28  tRNA pseudouridine32 synthase
     LPB142_02200
    5.4.99.29  23S rRNA pseudouridine746 synthase
     LPB142_02200
Ribosome biogenesis [BR:rhp03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    LPB142_02200
Transfer RNA biogenesis [BR:rhp03016]
 Prokaryotic type
  tRNA modification factors
   Psudouridine synthases
    LPB142_02200
SSDB
Motif
Pfam: PseudoU_synth_2
Other DBs
NCBI-ProteinID: AOZ68269
UniProt: A0A1D9M963
Position
443208..443861
AA seq 217 aa
MNDFVYTPTAEQPRVIHADHEILVVDKPAGLLSVPGKGEDKADCLIERLRGAFPEILLVH
RLDMDTSGVMIFGLTPHAQRHLGLQFENRQTKKHYLARLWGHLAPKEGRVDLPLIVDWPN
RPKQHVNFETGKPAQTDWRVLRHDPDGTTRVRLTPLTGRSHQLRVHMRELGHAILGDPLY
AEGPGRDFPRLMLHAESLRIRHPDGGAHMTFTAPCPF
NT seq 654 nt   +upstreamnt  +downstreamnt
atgaacgatttcgtctatacccccacggccgagcagccccgcgtgatccatgccgatcac
gagatccttgtcgtcgacaagcccgcggggctcctgtcggtgcccggcaagggcgaggac
aaggccgattgcctgatcgagcggctgcgcggcgccttccccgagatcttgctcgtgcac
cggctcgacatggatacctcgggggtgatgatcttcgggctgacgccccatgcgcagcgc
cacctcgggctgcaattcgagaaccgccagacgaagaaacactacctcgcgcggctctgg
gggcatctggcgccaaaggaggggcgggtcgatctgccgctcatcgtcgattggccgaac
cgcccgaaacaacatgtgaatttcgagaccggcaaacccgcccagaccgattggcgagtg
ctgcgccacgacccggatggcacgacgcgggtgcgcctcaccccgctgaccggccgcagc
caccagctgcgcgtgcatatgcgcgagctcggccatgcgatcctcggcgatccgctttac
gccgaggggccggggcgcgatttcccgcgcctgatgctccatgccgagagcctgcgcatc
cgccatcccgatggcggcgcacatatgacattcaccgcgccctgcccgttctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (12)   

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