KEGG   Rhodobacter sp. LPB0142: LPB142_15825
Entry
LPB142_15825      CDS       T04631                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
rhp  Rhodobacter sp. LPB0142
Brite
KEGG Orthology (KO) [BR:rhp00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:rhp02048]
    LPB142_15825
Enzymes [BR:rhp01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     LPB142_15825
Prokaryotic defense system [BR:rhp02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   LPB142_15825
SSDB
Motif
Pfam: SWI2_SNF2 ResIII HSDR_N DEAD USP8_dimer
Other DBs
NCBI-ProteinID: AOZ70618
UniProt: A0A1D9MFS3
Position
3260893..3263913
AA seq 1006 aa
MVSNTKEVALEQAIQRHLTGLTTEELAGQPAPEGHGPFRLGLPADFDAEYALDTRLFWEF
LETTQGKELAKLKARNPGDWQRKVLERFDRLIKKNGVLHLLKKGLAVDDAFFALMYPAPL
ASSAAKVHENFAANIFSVTRQVRYSQTNPGEEIDMVLFLNGLPLITIELKNAWTGQTARY
HGQKQYRDGRDATQPLLQFGRALVHMAVDTDEVFMTTKLAGPATFFLPFNKGHEQGEGNP
PNPKGHKTAYLWEEVFTKESLAGIIQHFVLLEGKATDPLAKKSMIFPRYHQLEVVRRLLT
HAATTGVGHSYLIQHSAGSGKSNSITWTAYQLIETYPAKVGIPGAKGLDQPLFDSVIVVT
DRRLLDKQLRENIKDFSEVKNIVAPALRSADLKSALENGKKIIITTIQKFPFIIEGIADL
SDKRFAVIIDEAHSGQSGSAHDNMNRAMGAGDQDPDEDDPQDRILAAMQSRKMRGNASYF
AFTATPKNTTLEKFGERQPDGSFKPFHLYSMKQAIEEGFILNVLANYTTYKSYYEIQKSI
ADNPLFDTKKAQKKLRAYVERSQQTINTKAEIMLDHFIEHVVTPKKLRGKAKGMIVTQNI
EAAIRYYKAVTKLLADRGNPFKALIAFSGEKVVDGVTYTEAEMNGFPEADTRDRFDEDDY
RLLVVANKYLTGFDQPKLTTMYVDKKLQYVLAVQALSRLNRSAPKLGKRTEDLFILDFFN
DVTDIKAAFDPFYTVTTLSSATDVNVLHELKGSLDQVGVYEWQEVEEFVTRYFAGEDAQT
LSPLIDVAADRFNQQLELAEKDKIDFKIKARQFVKIYGQMASIMPFEVLEWEKLFWFLKF
LVPKLKIKDPDQDMLDELLEAVDLSSYGLERTKLNHTIGLDASPTELEPQNPNPRGYRDG
EPEKDPLDEIIRSFNERWFQGWSATPEEQRVKFINVVNSIRSHPDYRDKYEANSDPFNRS
LAFEKILHEVMLKRRKEELELYKLFASDPAFKSAWTQSIATVLDGA
NT seq 3021 nt   +upstreamnt  +downstreamnt
atggtcagcaacaccaaggaagtggcactggaacaggcgatccagcggcacctgacgggc
ctgacgaccgaagagctggccggccaacccgcgccggagggtcacggccccttccgtctt
ggcctgcccgccgatttcgacgccgaatacgcgctcgacacccggctgttctgggagttt
ctggaaaccacccaaggcaaagagctggccaagctgaaggcccgcaatcccggcgactgg
cagcgcaaagtccttgaacgcttcgaccgtctgatcaagaagaacggcgtgctgcatctg
ctgaaaaagggcctcgccgtcgatgacgccttcttcgcgctgatgtaccccgcgccgctg
gccagttccgccgccaaggtccacgaaaacttcgccgccaatatcttcagcgtgacccgg
caagtccgctattcgcagaccaacccgggcgaagagatcgacatggtcctcttcctcaac
gggttgccgctgatcaccatcgagttgaagaacgcctggaccggccagaccgcccgctat
cacggccaaaagcagtatcgcgacggccgcgacgccacccagcccctgctgcagttcggc
cgcgcgctggtgcatatggccgtggacaccgacgaggtgttcatgaccacgaaactggcc
gggcctgcgacattcttcctgcccttcaacaagggccatgaacagggcgaaggcaacccg
cccaacccgaagggccacaagaccgcctatctgtgggaagaggttttcaccaaggaaagc
cttgcgggcatcatccagcatttcgtgctgctggagggcaaggcgactgacccgctggcc
aagaagtcgatgatctttccgcgctatcaccagttggaggtggtgcgccgcctgctgacc
catgcggcaacgaccggcgtggggcacagctacctgatccagcactcggcgggttcgggc
aagtcgaactcgatcacctggaccgcctatcagctgatcgagacctatccagccaaggtg
ggcattccgggcgccaaggggctggaccagccgctgttcgacagcgtgatcgtggtgacc
gaccggcggcttctggacaagcagctgcgcgagaacatcaaggatttctccgaggtcaag
aacatcgtcgccccggcgctgcggtcggcagatctgaaatcggcgctggagaacggcaag
aagatcatcatcaccacgatccagaagttccctttcatcatcgaggggatcgccgacctg
agcgacaagcggttcgcggtgatcatcgacgaggcccacagcggccaaagcggcagcgcg
catgacaacatgaaccgcgcgatgggtgcgggcgatcaggacccggacgaggatgacccg
caggaccggatcctcgcagcgatgcagtcgcgcaagatgcgcggcaacgcctcgtatttc
gccttcacggccacgcccaagaacacgacgctggaaaagttcggcgagcgccagcccgac
ggcagttttaagcccttccacctctacagcatgaagcaggccatcgaggaaggcttcatc
ctcaacgttttggcgaattacacgacctacaagagctattacgagatccagaagtcgatt
gccgacaaccccctgttcgacacgaagaaggcccagaagaagctgcgcgcctatgtcgag
cggagccagcagacgatcaacaccaaggccgagatcatgctcgaccatttcatcgagcac
gtggtgacgccgaaaaagctgcgcggcaaggccaaggggatgatcgtcacccaaaacatc
gaggcggccattcgctactacaaggcggtgaccaagctgctcgcggaccggggaaacccg
ttcaaggcgctgatcgcattctcgggcgagaaggtcgtggacggggtgacctacaccgaa
gccgagatgaacggctttcccgaagccgacacgcgggaccggttcgacgaggacgactac
cggctgttggtggtggccaacaagtatctgaccggtttcgaccagccgaaactgaccacg
atgtatgtggacaagaagctgcagtacgtcctcgctgtgcaggcgctgtcacggctgaac
cgttcggcaccgaaactcggcaaacggaccgaggacctgttcatcctggacttcttcaac
gacgtgaccgacatcaaggcggccttcgaccccttctacactgtcaccaccctttcatcc
gcaacggatgtgaatgtccttcacgagctgaagggatcgcttgaccaggtcggcgtatac
gaatggcaggaggtcgaagagttcgtcacgcgctacttcgcgggtgaggatgctcagacg
ctcagcccgttgatcgacgtggcggccgatcggttcaaccagcaactggaactagccgag
aaggacaagatcgacttcaagatcaaggcgcggcagttcgtcaagatctatggccagatg
gcgtcgatcatgccgttcgaggttctggaatgggagaagctcttctggttcctgaagttc
ctggtaccaaagctgaagatcaaggatccggaccaggacatgctggacgagttgctggag
gccgtcgacctatcctcttatggtctggagcggaccaaactgaaccacacgatcggtctc
gacgcatccccaaccgaactcgaaccccagaaccccaacccgcggggctaccgcgatggt
gaacccgagaaagaccccctcgacgagatcatccggtccttcaacgaacgatggtttcag
gggtggagcgccacaccggaagaacaacgggtgaagttcatcaatgtcgtgaacagcatc
cggtcgcaccccgactaccgcgataagtatgaggcgaattctgatccgttcaaccgcagt
ctagcatttgaaaagattctacatgaagtcatgctgaaacgccggaaggaagagctggaa
ctatacaagctttttgcctcggatccggcattcaagtcagcatggacacaaagcatcgct
accgtcctcgacggggcataa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (14)   

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