KEGG   Rhodococcus sp. p52: IM25_16405
Entry
IM25_16405        CDS       T05434                                 
Name
(GenBank) primosome assembly protein PriA
  KO
K04066  primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
Organism
rhq  Rhodococcus sp. p52
Pathway
rhq03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rhq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    IM25_16405
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rhq03400]
    IM25_16405
Enzymes [BR:rhq01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     IM25_16405
DNA repair and recombination proteins [BR:rhq03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     IM25_16405
SSDB
Motif
Pfam: PriA_3primeBD
Other DBs
NCBI-ProteinID: AOD22981
UniProt: A0A1B2UFP3
Position
3538322..3540340
AA seq 672 aa
MAADFDAAEVDPVARVLPLLPVPHLDREFDYLIPRDLDADARPGVRVRVRFAGRLVDGFL
LARAATSDHTGKLGRLDRVVSSEQVLTPEIAALAEEVATRYAGTRADVLRLAVPPRHARV
EAEASRPPEPPPVPEIDPAAWGRYRHGENFLEALGGGRAPRASWQALPGEDWPRRLAELA
ALTLASGKAAVLVVPDQRDLDRLVKACADVAGADHVVGLAAGLGPAERYRRWLAALRGSA
RIVVGTRAAVFAPTPDLGLLVVWDDGDDLHCEPRSPYPHAREVAALRAHAVGAAIVIAGH
ARTAETQALVEAGWAHDLVAPRDVVRACAPKVTALADSDHALARDPAARAARLPAIAFAA
ARSALAVDRPVLVQVPRRGYVPALACGKCRAPARCRHCNGPLALPTAAGPDGAAIPACRW
CGVADARHRCHACGARSLRAVVVGAARTAEELGRAFPGVPVVTSGGNDVKHTVPGSASLV
VSTVGAEPVAEGGYGAALLLDGWALLGRADLRATEETMRRWLTASALVRSFADGGQVVVV
ADSGIPTVQALVRWDPVGHAQSEVSERAEVGFPPAVHMAAIDGSSAAVAELLEATHLPDG
AEVLGPVPLPPGQRLPFGSEGPEPEDVHRMIVRVARERGRALGRALRDAQATRTARRADG
PLRVQVDPPRIG
NT seq 2019 nt   +upstreamnt  +downstreamnt
gtggctgctgatttcgacgccgccgaggtcgatccggttgcgcgggttctcccgctgcta
ccggttccgcacctcgaccgggagttcgactacctgatcccgcgcgacctggacgcggac
gcccgtccgggcgtccgcgtccgcgtccgcttcgccggacgtctcgtcgacggtttcctg
ctcgcacgcgccgcgacgagcgatcacaccggcaagctcggccgactcgaccgcgtcgtc
tcgtccgagcaggtcctcacgcccgagatcgctgctctggcagaggaagtcgcgacccgc
tatgccgggacccgggccgacgtgctgcgtctggcggtacctccgcgacacgcacgtgtc
gaagccgaggcgtcgcgcccaccggaacctccgcctgttccggagatcgatcctgccgcg
tggggccggtaccggcacggcgagaacttcctcgaagcgctcggcggcggccgcgccccg
cgcgcgtcctggcaggcgctgcccggtgaggattggccccgacggctcgccgaactcgcc
gcactgaccctcgcctcggggaaggcggccgtgctcgtcgttcccgaccagcgtgacctc
gaccgtctcgtgaaggcgtgtgcagacgtcgccggggccgatcacgtcgtcggcctcgcc
gccggcctcggaccggccgaacggtatcgacgctggcttgcggcgctgcgcggatccgcg
cgcatcgtcgtcgggacccgggccgccgtcttcgccccgacccccgatctcgggctcctc
gtggtgtgggacgacggcgacgacctgcactgcgaaccacggtccccgtatccgcacgcc
cgcgaagtggctgctctgcgcgcccacgcggtcggtgccgccatcgtgatcgccgggcac
gcccgcaccgcggagacccaggcgctcgtcgaggccggctgggcacacgatctcgtggca
ccccgcgacgtcgtacgggcgtgcgcgccgaaggtcacggccctcgccgacagcgaccac
gcactcgcacgggatccggccgcgcgtgccgcgcgactgcctgccatcgcgttcgccgcc
gcccgatccgctctcgcggtcgaccgcccggtgctcgtgcaggtaccgcggcgcggatac
gtgcccgcgctcgcgtgcggaaagtgccgggcacccgcccgctgccggcactgcaacggc
ccgctcgcactgcccacggcggccggtcccgacggtgccgcgatcccggcatgccgctgg
tgcggtgtcgccgatgcgcgtcaccgctgccacgcgtgcggcgcgcgctcgttgcgggcc
gtggtggtcggggcggcccgcaccgccgaagaactgggccgcgcctttccgggcgtgccg
gtcgtgacctccggcggcaacgacgtcaagcacaccgtgcccggttcggcgtcgctcgtc
gtctccaccgtgggcgccgaacccgtcgccgagggcggttacggggcggcgctgctcctg
gacgggtgggccctgctcggccgtgccgatctgcgcgccaccgaggagacgatgcgccgc
tggctcaccgcatcggcgctcgtacggtcgttcgccgacggaggacaggtcgtggtcgtc
gccgattccgggatccccaccgtgcaggcgctcgtgcgttgggatcccgtgggacacgcc
cagtccgaggtctccgaacgagccgaggtcggtttcccgcccgcggtccacatggccgcg
atcgacgggtcgtccgcggcggtcgccgaactgctcgaggccacacacctgcccgatgga
gccgaggtgctcgggcccgtgccgctcccgccggggcaacgactgccgttcggatccgag
ggacccgaaccggaggacgtgcaccggatgatcgtgcgggtcgcacgcgagcgcggtcgc
gcactcggtcgcgccctgcgcgacgcccaggccacccgcacggcgcgtcgcgcggacggt
ccgctgcgggttcaggtggatccgccgcgtatcggctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

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