KEGG   Rhodococcus fascians PBTS 2: A3Q41_01139
Entry
A3Q41_01139       CDS       T05030                                 
Symbol
pdhD
Name
(GenBank) Dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
rhs  Rhodococcus fascians PBTS 2
Pathway
rhs00010  Glycolysis / Gluconeogenesis
rhs00020  Citrate cycle (TCA cycle)
rhs00260  Glycine, serine and threonine metabolism
rhs00280  Valine, leucine and isoleucine degradation
rhs00310  Lysine degradation
rhs00380  Tryptophan metabolism
rhs00620  Pyruvate metabolism
rhs00630  Glyoxylate and dicarboxylate metabolism
rhs00640  Propanoate metabolism
rhs00785  Lipoic acid metabolism
rhs01100  Metabolic pathways
rhs01110  Biosynthesis of secondary metabolites
rhs01120  Microbial metabolism in diverse environments
rhs01200  Carbon metabolism
rhs01210  2-Oxocarboxylic acid metabolism
rhs01240  Biosynthesis of cofactors
Module
rhs_M00009  Citrate cycle (TCA cycle, Krebs cycle)
rhs_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rhs_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
rhs_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:rhs00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    A3Q41_01139 (pdhD)
   00020 Citrate cycle (TCA cycle)
    A3Q41_01139 (pdhD)
   00620 Pyruvate metabolism
    A3Q41_01139 (pdhD)
   00630 Glyoxylate and dicarboxylate metabolism
    A3Q41_01139 (pdhD)
   00640 Propanoate metabolism
    A3Q41_01139 (pdhD)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    A3Q41_01139 (pdhD)
   00280 Valine, leucine and isoleucine degradation
    A3Q41_01139 (pdhD)
   00310 Lysine degradation
    A3Q41_01139 (pdhD)
   00380 Tryptophan metabolism
    A3Q41_01139 (pdhD)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    A3Q41_01139 (pdhD)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rhs04147]
    A3Q41_01139 (pdhD)
Enzymes [BR:rhs01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     A3Q41_01139 (pdhD)
Exosome [BR:rhs04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   A3Q41_01139 (pdhD)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 GIDA DAO HI0933_like FAD_oxidored AlaDh_PNT_C Amino_oxidase FAD_binding_2 Lycopene_cycl NAD_binding_8 3HCDH_N Thi4 2-Hacid_dh_C FAD_binding_3 NAD_binding_9 NAD_binding_7
Other DBs
NCBI-ProteinID: AMY22450
UniProt: A0A143QHD1
Position
1151881..1153248
AA seq 455 aa
MSDVDVLILGGGSGGYSCALRAEQLGLTVVLVEEDKLGGTCLHRGCIPTKALLHTAEVAD
AVRGSAHVGVTASLTGVDMLAALEYQRSVVAGLYSGLKGLLKRPNIEIVSGRGQVVGPRT
VEVEGRRITGASLVLATGSYSRTIPGIELGPRVLTSDGALALDRVPESVVVLGGGVIGIE
FASIWASFGAKVTVVEALDRIVPGEDEWSSKQLTKALRKRGVDIRTGTKVETVTESSDDV
AVALSSGDTLSTDLVLVSVGRGPRTEGLGLAEQGIATERGFVTVDDNLLTTADGVYAVGD
IVAGYQLAHRGFQHGMFVAEHIAGLAPARIDGDLVPRVTYSHPEVASVGLTEKAAEEKYG
TVTSVVYDLGGNGKSRILATAGGVKVIRAREDGPVVGVHLVGDRVGELIGEAQLAVAWEA
LPSEVGSFVHAHPTQNEAFGEAMMALSGRPLHAHS
NT seq 1368 nt   +upstreamnt  +downstreamnt
atgagcgacgtggacgttctcatcctcggtggcggatccggtgggtactcctgtgccctg
cgcgccgagcaactcggcctgacggtcgtattggtcgaggaggacaagctcggcggcact
tgcctccatcgcgggtgcatccccaccaaggctctgctgcacacggcggaggttgccgat
gcggtccgcggttcggcgcatgtcggcgtcacggcatcgttgacgggtgtggatatgctt
gcggcactggagtatcagcgcagcgtggtcgccggcctgtactccggactcaagggcttg
ttgaagcgtccgaacatcgagatcgtctcgggccgtggtcaggtggtcggtcctcgcacc
gtcgaggtggagggtcgacgcatcaccggggcttcactggttctcgccactgggtcgtat
tcgcgcaccatccccggtatcgaactgggtccgcgagtgctcaccagcgacggcgcgttg
gcgctcgaccgagtaccggagtccgtcgtcgtactgggcggcggagtcatcggcatcgaa
ttcgccagcatctgggcctctttcggtgccaaggtcaccgtcgtcgaagcactcgatcgc
atcgttccgggtgaggacgaatggtcctcgaagcagctgaccaaggctctgcgcaagcgc
ggcgtcgacattcgtaccggcaccaaggtcgagacagtcaccgagtcgtccgacgacgtc
gcggtggcgctgtcctccggcgacaccctctcgacggatctcgtgctcgtctccgtcgga
cgcggcccccgcaccgaaggcctcggtctggccgagcagggcatcgccaccgaacgtggc
ttcgtcactgtcgacgacaatctgctcaccaccgcagacggcgtctatgccgtcggcgac
atcgtggcgggctatcagttggctcaccgcggattccagcacggcatgttcgtcgccgaa
cacattgccggactcgcgccggcacgtatcgacggcgatctcgttccgcgcgtgacctat
tcgcatccggaggtggcgtcggtcggtctcaccgagaaggccgcggaggaaaagtacggc
accgtgacctctgtggtctacgacctcggcggcaacggcaagagccgcatcctcgccact
gcaggtggcgtcaaggtgattcgtgcacgcgaggacggccctgttgtgggagtccacctc
gtcggtgaccgcgtgggcgagctgatcggcgaggcgcaactcgcggtggcatgggaagca
ctgccatcggaggtcggtagcttcgtgcacgcccaccccactcagaacgaagcattcggt
gaggcaatgatggcgctctcgggtaggccgttgcacgcgcacagctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (23)   
   KEGG PATHWAY (16)   
   KEGG MODULE (7)   
Chemical substance (27)   
   KEGG COMPOUND (27)   
Chemical reaction (11)   
   KEGG ENZYME (1)   
   KEGG REACTION (10)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (19)   
   Pfam (19)   
All databases (88)   

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