KEGG   Rhodococcus sp. PBTS 1: A3Q40_00134
Entry
A3Q40_00134       CDS       T05182                                 
Symbol
sigE_1
Name
(GenBank) ECF RNA polymerase sigma factor SigE
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
rhu  Rhodococcus sp. PBTS 1
Brite
KEGG Orthology (KO) [BR:rhu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rhu03021]
    A3Q40_00134 (sigE_1)
Transcription machinery [BR:rhu03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     A3Q40_00134 (sigE_1)
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4_2 Sigma70_r4 Sigma70_ECF HTH_23
Other DBs
NCBI-ProteinID: AMY17549
UniProt: A0A143Q3L8
Position
complement(141720..142298)
AA seq 192 aa
MQATNSAAAASTDDSAGLVNAAALGDRAAFETLVRTHGPAMYRFARNMVRDDGLAEEIVQ
DAFVAAWKSLEHYRSESALRTWLFGIVNHKAIDATRRRVPRPAEDWLFEDAVGDAVAADD
PASVATGSDFLVALRRALSDLPEVQRSCWLLREVEGMTHVEIGETLSMSPSAVRGQVTRA
RRTLSERMAPWR
NT seq 579 nt   +upstreamnt  +downstreamnt
atgcaggcgacgaactccgctgccgccgcgagcaccgacgattccgccggcctcgtgaac
gccgccgcgctcggcgatcgggcggcgttcgagactctcgtgcgtacccacggcccggcg
atgtatcgcttcgcccgcaacatggtgcgtgacgacgggctggccgaggagatcgtgcag
gacgcgttcgtcgcagcctggaagagcctcgagcactatcggtcggaatcggcgctgcgg
acctggctgttcggcatcgtcaaccacaaggccatcgacgcgacgcggcgtcgcgtgccg
cgtcccgcggaggactggttgttcgaggacgcggtgggcgacgccgtcgcggccgacgat
ccggcctcggtcgccaccggctccgacttcctcgtcgctctccgccgcgcgctgtcggat
ctgccggaagtccagcgatcgtgctggttgctccgtgaagtggagggaatgacccacgtc
gagatcggggagacgctgtcgatgtccccgtccgcggtccgcggacaggtcacccgtgct
cgacgaactctgagcgaaaggatggccccatggcggtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (12)   

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