KEGG   Rhizobium sp. S41: BA939_08735
Entry
BA939_08735       CDS       T05451                                 
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
rhv  Rhizobium sp. S41
Pathway
rhv03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rhv00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BA939_08735
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rhv03021]
    BA939_08735
   03019 Messenger RNA biogenesis [BR:rhv03019]
    BA939_08735
Transcription machinery [BR:rhv03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     BA939_08735
Messenger RNA biogenesis [BR:rhv03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     BA939_08735
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N OB_RNB AAA_22 AAA_25 NACHT DUF6360 Spore_III_AA AAA
Other DBs
NCBI-ProteinID: ANV25190
Position
1:complement(1817099..1818355)
AA seq 418 aa
MKLQELKSKSPTDLLTFAESLEVENASTMRKQELMFAILKVLASQDIEIIGEGVVEVLQD
GFGFLRSANANYLPGPDDIYISPSQIRRFSLKTGDTVEGPIRGPKEGERYFALLKVNTIN
FDDPEKIRHKVHFDNLTPLYPNERFKMELDVPTSKDLSSRVIDLVAPLGKGQRGLIVAPP
RTGKTVLLQNIAHSITANHPECYLIVLLIDERPEEVTDMQRSVKGEVVSSTFDEPAVRHV
QVAEMVIEKAKRLVEHGRDVVILLDSITRLGRAYNTVVPSSGKVLTGGVDANALQRPKRF
FGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKVADKRIFPALDI
LKSGTRKEDLLVPRQDLQKIFVLRRILAPMGTMDAIEFLIDKLKQTKNNSDFFESMNT
NT seq 1257 nt   +upstreamnt  +downstreamnt
atgaagcttcaggaacttaagagcaaatcgcctaccgacttgctgacttttgccgaatcc
ctggaagttgaaaatgcgagcaccatgcgcaagcaggagctcatgttcgcaatcctcaag
gttctcgcgagccaggacatcgaaatcatcggcgaaggcgtcgttgaagttctgcaggac
ggtttcgggttcctgcgatccgcaaacgcaaactatctgccgggtccggacgatatttac
atctctccctcgcagatccgtcggttttcgctgaagaccggcgatacggttgaaggaccg
atccgcggtcccaaggaaggtgagcgctacttcgcccttctgaaggtcaacacgatcaat
ttcgacgatcccgaaaagatccgccacaaggtccatttcgataatctgacgccgctctat
ccgaacgagcggttcaagatggagcttgatgtcccgacatccaaggatctgtcgtcgcgg
gttatcgatctcgtcgcaccgctcggcaagggccagcgtggcttgatcgttgcaccgcca
cggaccggtaaaacggttctgctacagaacattgcccattcgatcacggcaaatcacccg
gaatgttacctcatcgttcttttgatcgacgagcgtccggaagaagtcaccgacatgcag
cgttcggtcaagggagaggttgtgtcctccaccttcgatgaaccagcggtacgccacgta
caggtcgctgaaatggtcatagaaaaggcgaagcgcctcgttgaacatggccgcgacgtc
gtcattctgctcgattccatcacccgtcttggtcgcgcctataacaccgtcgttccctct
tccggcaaggttctgaccggtggtgtggacgccaacgccctgcagcggccgaagcgcttc
tttggcgccgcccgcaatatcgaagaaggcggctcgctgacgatcattgcgacggcgctg
atcgacactggcagccgtatggatgaagtcatcttcgaagagttcaagggtacgggtaac
tcggaaatcgtgcttgaccggaaggtagcagacaagcgtatcttcccggcgctggacatt
ctgaaatctggtacccgtaaggaagacctcctggtgccgcgccaggatttgcagaagatt
tttgttcttcgccgtattctcgcgccgatgggaacgatggacgccatcgagttcctcatc
gataagctgaagcagactaaaaacaattcggatttcttcgaatcgatgaacacctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (10)   
   Pfam (10)   
All databases (18)   

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