KEGG   Rhodoferax koreense: RD110_06865
Entry
RD110_06865       CDS       T04721                                 
Name
(GenBank) ribosomal large subunit pseudouridine synthase C
  KO
K06179  23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
Organism
rhy  Rhodoferax koreense
Brite
KEGG Orthology (KO) [BR:rhy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:rhy03009]
    RD110_06865
Enzymes [BR:rhy01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.24  23S rRNA pseudouridine955/2504/2580 synthase
     RD110_06865
Ribosome biogenesis [BR:rhy03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    RD110_06865
SSDB
Motif
Pfam: PseudoU_synth_2 S4 FAS_meander
Other DBs
NCBI-ProteinID: APW36950
UniProt: A0A1P8JT86
Position
complement(1460375..1461379)
AA seq 334 aa
MKNIIGANKPPLAPEVKLVTVDEDGAGQRLDNFLMRHLKGVPKTHVYRIIRSGEVRINKG
RAAADTRLAEGDVVRLPPVRTSERATEKAEAMAEAVHAAPAREFPVIFEDDHLLAIDKPA
GVAVHGGSGVSFGVIEQLRIARPGAKFLELVHRLDRETSGILLIAKKRSALTRLQDQFRE
RETGKTYLALVQGAWPANKKVLDKPLHKYLLPDGERRVKVVARDDPDGMRSLSLVKVRQK
LAGYSLLEVTIKTGRTHQIRVHLASEGHGIVGDDKYGDFELNKALQKQGLKRMFLHAWHL
TLNHPGTGEPMALDAPLPQELQAFMDAQPGVGAN
NT seq 1005 nt   +upstreamnt  +downstreamnt
gtgaaaaacattataggtgctaacaagccccctctcgcgcctgaagtcaaattggtaaca
gttgatgaagatggcgccggtcagcggctggacaacttcctcatgcgccacctcaaaggg
gtgccgaaaacgcacgtctaccgcatcatccgcagcggcgaggtgcgcatcaacaagggg
cgcgcggccgccgacacacggctggccgaaggcgatgtggtgcggctgccgccggtgcgc
acctccgaacgcgccaccgaaaaggccgaggccatggccgaggcggtgcacgccgcgccg
gcacgcgaattcccagtgatcttcgaagacgaccacctgctggccatcgataagcccgcc
ggcgtggcggtgcacggcggcagcggcgtgagtttcggagtgatcgagcagctgcgcatc
gcgcggccgggcgcgaagttcctggaactggtgcaccggctggaccgagagacctcgggc
atcctgctgatcgccaagaagcgcagcgcgctcacccggttgcaggaccagttccgcgaa
cgcgaaaccggcaagacctacctggccctggtgcagggcgcctggccggccaacaagaag
gtgctcgacaagccgttgcacaaatacctgctgcccgacggcgagcggcgcgtgaaggtg
gtcgccagggacgacccggacggcatgcgctcgctgagcctggtgaaggtgcggcaaaag
ctggccggctacagcctgctcgaggtgacgatcaagaccggccgcacgcaccagatccgc
gtgcacctggccagcgaaggccacggcatcgtgggcgacgacaaatatggcgatttcgag
ctgaacaaggcgttgcagaaacaaggcctcaaacgcatgttcctgcatgcctggcatctg
acgctgaaccatcccggcacgggcgaaccgatggcgcttgatgcgccgttgccacaggag
ttgcaggccttcatggacgcgcaaccgggtgtgggtgcaaactag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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