KEGG   Rhodoplanes sp. Z2-YC6860: RHPLAN_04750
Entry
RHPLAN_04750      CDS       T04290                                 
Name
(GenBank) RNA pseudouridine synthase
  KO
K06177  tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
Organism
rhz  Rhodoplanes sp. Z2-YC6860
Brite
KEGG Orthology (KO) [BR:rhz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:rhz03009]
    RHPLAN_04750
   03016 Transfer RNA biogenesis [BR:rhz03016]
    RHPLAN_04750
Enzymes [BR:rhz01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.28  tRNA pseudouridine32 synthase
     RHPLAN_04750
    5.4.99.29  23S rRNA pseudouridine746 synthase
     RHPLAN_04750
Ribosome biogenesis [BR:rhz03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    RHPLAN_04750
Transfer RNA biogenesis [BR:rhz03016]
 Prokaryotic type
  tRNA modification factors
   Psudouridine synthases
    RHPLAN_04750
SSDB
Motif
Pfam: PseudoU_synth_2
Other DBs
NCBI-ProteinID: AMN38940
UniProt: A0A127ENT1
Position
complement(522792..523562)
AA seq 256 aa
MTPEDIGSRLLYRDGLMLIINKPAGLAVHKGPKGGASLEDYFDVLRFGLPRMPALAHRLD
KETSGCLVLGRHRKALADLNLMFRHGKVGKTYWAVVEGGPQEPEGKIDLPLGRLDDKIGW
WMKHDPEGLPSQSTWNVMGRANGMTWLALEPLTGRTHQLRVHCATSGFPVLGDNIYGSAP
RTGGARLHLHAREIVVPLYKNKPPIKVTAPVPEHMKERLKACGWTEDMDRDVNPPLGLSR
PPRKEPANSPPQGERQ
NT seq 771 nt   +upstreamnt  +downstreamnt
atgacaccggaagacatagggagccggctcctttatcgcgacgggctgatgcttatcatc
aacaagcccgcaggactggccgtgcacaagggcccgaaaggcggcgcgagcctggaggac
tatttcgacgtgctgcggttcggcctgccgcggatgcccgcgctcgcccaccggctcgac
aaggaaacctctgggtgtctggtgctcggacgccaccggaaggcgttggccgatctgaac
ctgatgttccgtcacggcaaggtcggcaagacctattgggccgtggtcgagggcgggccg
caggaaccggagggcaaaatcgacctgccgctcggccggctcgacgacaagatcggctgg
tggatgaaacacgatcccgaaggcctgccgtcccagagcacctggaacgtgatgggccgc
gccaacggcatgacctggctcgcgctcgagccgctgaccggccggacgcatcagcttcgc
gtccattgcgcgacgtcgggctttccggtgctgggcgacaacatctacggcagcgcgccg
agaacgggcggtgcgcgactgcatctgcatgcgcgcgagatcgtggtgccgctctataag
aacaagccgccaatcaaggtgacggcgccggtgcccgagcacatgaaggagcggctgaag
gcatgcggctggaccgaagacatggaccgcgacgtcaacccgccgctcggtctttcacgg
ccgccgcgcaaagagcccgccaacagcccgccgcaaggcgagcgtcagtag

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (16)   

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