KEGG   Roseovarius indicus: RIdsm_00016
Entry
RIdsm_00016       CDS       T06222                                 
Symbol
lcfB_1
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
  KO
K18661  malonyl-CoA/methylmalonyl-CoA synthetase [EC:6.2.1.76 6.2.1.-]
Organism
rid  Roseovarius indicus
Pathway
rid00280  Valine, leucine and isoleucine degradation
rid01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:rid00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00280 Valine, leucine and isoleucine degradation
    RIdsm_00016 (lcfB_1)
Enzymes [BR:rid01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.76  malonate---CoA ligase
     RIdsm_00016 (lcfB_1)
SSDB
Motif
Pfam: AMP-binding AMP-binding_C
Other DBs
NCBI-ProteinID: QEW24244
UniProt: A0A0T5P6Q2
Position
15622..17157
AA seq 511 aa
MTCTIHDMFDRRCEADGEKVLFELKERPNVSYAATRATVRRLASVLTELGVGPGDRVAAQ
VKKSPEAVMLYLACLRAGAVFLPLNTGYTGAEIDYFLGDAEPRLFVCTPETLDAHLPRGS
AAMAVESLGTVGDGTLMARAAGATEQAQAVARAADDPAAILYTSGTTGRSKGAILSHGNL
ASNAVALNETWRFSENDRLIHALPIFHTHGLFVACNMALASGATLIFLTRFDPDEIIDEM
ADATVLMGVPTFYTRLLASPRLDPLATAAMRLFVSGSAPLQEQTHARFAERTGHTILERY
GMTETCMIASNPYDGERRVGAVGFPLPEVEVRVTDLETGDVVPGGETGAIEVRGPNVFQG
YWRMPEKTADEFRDDGFFITGDLGRMDADGYLHIVGRNKDLVITGGYNVYPKEIETMIDA
LPEVAESAVVGLPHPDFGEGVTAIVVPKDGAVIDKACVLDALSGTLARYKQPKTVMVVDA
LPRNVMGKVQKNELRGRFADLYAPARPTSDA
NT seq 1536 nt   +upstreamnt  +downstreamnt
atgacttgcacgatccatgacatgttcgaccgccgttgcgaggcagacggagagaaggtg
ctgttcgaactgaaagagcggccgaacgtgagctatgccgcaacgcgggccacggtgcgg
cggctggcgagcgtgctgaccgagctgggcgtcggcccgggggaccgtgtggccgcgcag
gtgaagaagagccccgaggcggtgatgctgtacctggcctgtcttcgggcgggggccgtg
tttctgccgctcaacacgggctatacgggggcggagatcgactatttcctaggggatgcc
gagccgcggctgttcgtgtgcacgccggagacgcttgacgcgcatttgccgcgcggctcg
gcggcgatggcggtggagagcctgggcacggttggcgacgggacgttgatggcgcgtgcc
gccggggcgacagagcaggcgcaggcggtggcgcgcgcggccgatgacccggccgcgatc
ctgtatacctcggggacgaccgggcgatcgaaaggtgcgatcctgagccatgggaacctt
gcgtcgaacgctgtcgcgctgaacgaaacctggcggttttccgagaatgaccggctgatc
cacgcgctgccgatctttcacacgcacggtcttttcgtggcgtgcaacatggcgcttgcg
agcggggcgacgctgattttcctgacgcggttcgaccccgacgagatcatcgacgagatg
gccgacgcgacggtgctgatgggggtgccgaccttttacacgcggcttctggcctcgccc
cggctcgacccgttggcgacggcggcgatgcggctgttcgtgtcgggctctgcgccgctt
caggagcagacgcacgcccggtttgccgagcgcacggggcacactatcctggaacgctat
gggatgaccgagacctgcatgatcgcctcgaacccctatgacggagagcgccgcgtcggg
gcagtgggtttcccgctgccggaggtggaggtgcgggtgaccgacctcgagaccggggac
gtggtgccggggggcgagaccggcgcgatcgaggtgcggggcccgaacgtgttccagggc
tattggcggatgccggagaaaaccgcagacgagtttcgcgacgacggttttttcatcacc
ggggacctcggccggatggatgccgacggctatctgcatattgtcggacgaaacaaggat
ctggtgatcaccggtgggtacaacgtttacccgaaggagatcgagacgatgatcgatgcc
ctgccggaggtggcggaatctgccgtcgtcggcttgccgcacccggatttcggcgaaggc
gtcacggccatcgtggtgccgaaggacggggccgtgatcgacaaggcgtgcgtgctggat
gcgctgtcgggcacgctggcaaggtacaagcagcccaagacggtgatggtggtcgacgcg
ctgccgcgtaacgtgatgggcaaggtgcagaagaacgaattgcggggccggtttgccgat
ctttatgcgcccgcccggcccacgagcgacgcgtag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (18)   

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