KEGG   Roseovarius indicus: RIdsm_01940
Entry
RIdsm_01940       CDS       T06222                                 
Symbol
ykoU
Name
(GenBank) putative ATP-dependent DNA ligase YkoU
Organism
rid  Roseovarius indicus
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C mRNA_cap_enzyme
Other DBs
NCBI-ProteinID: QEW26144
UniProt: A0A0T5PDA4
Position
complement(2105323..2106918)
AA seq 531 aa
MKRFATLFATIDQTTKTTKKVEALATYLSEAPEDDRLWTIALFSGRRPRRTITTTRLREW
AAERAGIPLWLFEESYPIVGDLAETIALVLPEPSETHDDTLTTWITRLRALDAASEDDRK
AAILDAWNRMEPLERLVFNKLLTGGFRVGISRKLMTRALAQATGQDEAQLAHRLMGDWTP
EKTTYHSLIEAEDKAAELSRPYPFCLAYGLDEETPDSLGNPTDWHAEWKWDGIRGQLILR
GAEHFVWSRGEELMTDRFPELARARDFLPDGTVIDGEIVAWEDPHPLPFNALQKRIGRKT
VPKKLLKEAPVILLAYDLLEENGQDLRDLPFTTRRAKLDTLLQDLPQDAPLRPSPLIPFK
SWNDLAQTRATARDHRAEGVMLKRADSPYHVGRKKGDWWKWKLDPLTVDAVMIYAQQGHG
RRANLFTDFTFAVWSGNDLVPFTKAYSGLTDSEFRKITAWVRKNTLQRFGPVRQVRPEHV
FEIAFEGIFESPRHKSGIALRFPRMARWRHDKPVQEANSLDDLHALLSQYG
NT seq 1596 nt   +upstreamnt  +downstreamnt
atgaaacgcttcgccaccctcttcgccaccatcgaccagaccaccaagaccacgaaaaag
gtcgaggcgctggccacctacctctccgaggcgccggaagatgaccgcctctggacaatc
gcgcttttctccggccgccgcccccgccgcaccatcaccaccacccgcctgcgcgaatgg
gcggccgaacgcgccggcatccccctctggctcttcgaggaaagctaccccatcgtcggc
gacctcgccgaaaccatcgccctcgtcctgcccgaaccctccgagacgcatgacgacacc
ctcaccacctggatcacccgcctccgcgcgctcgacgccgcctcggaagacgaccgcaaa
gccgccatcctcgacgcctggaaccggatggagcccctcgaacgcctcgtcttcaacaag
ctcctcaccggcggcttccgcgtcggcatctcccgcaaactgatgacccgcgcgctggcc
caggccaccggtcaggacgaggcccaactcgcccaccgcctcatgggcgactggacgccc
gagaaaaccacctaccactccctcatcgaggccgaagacaaggcggccgagctttcccgc
ccctaccccttctgcctcgcctacggcctcgacgaggaaaccccggattctctcggcaat
ccaaccgactggcacgcggaatggaagtgggacggcatccgcggccaactcatcctccgc
ggcgccgagcacttcgtctggtcccgcggcgaagaactgatgaccgaccgcttccccgaa
ctcgcccgcgcccgcgatttcctccccgacggcaccgtgatcgacggcgagatcgtcgcg
tgggaagacccccacccgctccccttcaacgccctgcagaaacgcatcggccgcaagacc
gtgccgaagaaactgctcaaggaggcccccgtcatcctcctcgcctacgacctgctcgag
gaaaacggccaagacctccgcgacctccccttcaccacccgccgcgcgaaactcgacacc
ctcctgcaagacctgccccaagacgcccccctgcgcccctctcccctcatccccttcaaa
tcatggaacgacctcgcccaaacccgcgccaccgcccgcgaccaccgcgccgagggcgtc
atgctcaagcgcgccgacagcccctatcacgtgggccgcaagaagggcgactggtggaaa
tggaagctcgacccgctcaccgtcgacgccgtcatgatctacgcccagcaaggccacggc
cgccgcgccaacctcttcaccgatttcaccttcgcggtctggtccggcaacgacctcgtg
cctttcaccaaggcctattccggcctcaccgacagcgaattccgcaagatcaccgcctgg
gtccgcaagaacacgctgcaacgcttcggccccgtccggcaggtccgccccgagcatgtc
ttcgagatcgccttcgaaggcatcttcgagagcccccgccacaaatccggcatcgcgctc
cgcttcccccgcatggcccgctggcgccacgacaagcccgtgcaggaggccaacagcctc
gacgacctgcacgctctcctgtcgcaatacggctga

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (7)   

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