KEGG   Roseovarius indicus: RIdsm_04654
Entry
RIdsm_04654       CDS       T06222                                 
Symbol
dapE_3
Name
(GenBank) Succinyl-diaminopimelate desuccinylase
  KO
K01439  succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
Organism
rid  Roseovarius indicus
Pathway
rid00300  Lysine biosynthesis
rid01100  Metabolic pathways
rid01120  Microbial metabolism in diverse environments
rid01230  Biosynthesis of amino acids
Module
rid_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:rid00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    RIdsm_04654 (dapE_3)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:rid01002]
    RIdsm_04654 (dapE_3)
Enzymes [BR:rid01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.18  succinyl-diaminopimelate desuccinylase
     RIdsm_04654 (dapE_3)
Peptidases and inhibitors [BR:rid01002]
 Metallo peptidases
  Family M20
   RIdsm_04654 (dapE_3)
SSDB
Motif
Pfam: Peptidase_M20 M20_dimer Peptidase_M28
Other DBs
NCBI-ProteinID: QEW28814
UniProt: A0A0T5PFW3
Position
complement(4814513..4815664)
AA seq 383 aa
MTRQPTDPAALTADLIRCPSVTPEEGGALALLEARLGAAGFTCARADRNGVANLFARWGE
KGAEKSFGFNGHTDVVPVGDEAAWTVPPFGAEEKDGFLWGRGATDMKSGVAAFAAAAIDY
VTETPPEGAVILAITGDEEGDAVDGTAALLDWMDKEGERMDVCLVGEPTCPDRMGEMIKI
GRRGSLSAWFTITGVQGHSAYPHRAKNPLPAMARLMDRLASETLDEGTEHFDPSTLAVVT
IDTGNPATNVIPAQCRATVNIRFNDAHESQSLIDWMQYEMDKVASEFGVTGEMVVKVSGE
SFITPPGPLSELVAKAVEAETGVAPVLSTTGGTSDARFVKEHCPVVEFGLVGRTMHQVDE
RVEVEQIHQLKAVYARILKDYFG
NT seq 1152 nt   +upstreamnt  +downstreamnt
atgacccgccagcccaccgatcccgccgcattgaccgccgatctgatccgctgcccgtcc
gtgacaccggaggaggggggcgccctggcgttgctggaagcccggctcggcgcggccggg
ttcacctgtgcgcgggccgatcgcaacggtgtcgcgaacctgtttgcccgctggggcgag
aagggggcggagaagagtttcggcttcaacgggcataccgatgtggtgccggtaggcgac
gaggcggcatggacggtgcctccgttcggcgcggaggagaaggacgggttcctgtggggc
cggggggcgaccgacatgaaatcgggcgtcgcggcctttgccgccgccgcgatcgactac
gtgacggagacgccgccggagggggctgtcatcctggccatcaccggcgacgaggagggc
gatgccgtcgacgggacggcggcgctgcttgactggatggacaaggaaggcgagcggatg
gatgtctgccttgtgggcgagccgacctgccccgaccggatgggcgagatgatcaagatc
gggcggcgcgggtcgttgtcggcgtggttcacgatcaccggggtgcagggtcattccgcc
tatccccaccgggcgaagaacccgctgcccgcgatggcgcggctgatggaccggctggcg
agcgagacgctggacgaggggaccgagcatttcgacccctcgacgctggcggtggtgacg
atcgacaccggcaaccccgcgaccaacgtgatcccggcgcagtgccgggcgacggtgaat
atccggttcaacgatgcccatgagagtcagtcgctgatcgactggatgcagtacgagatg
gacaaggtcgccagtgagttcggcgtgacgggcgagatggtggtgaaggtgtcgggcgaa
agcttcatcaccccgccgggcccgttgtcggagttggtggcaaaggccgtcgaggcagag
accggggtcgcgccggtgttgtcgaccacgggcggcacgtctgatgcaaggttcgtgaag
gagcattgcccggtggtggaattcggtcttgtcggccgcacgatgcaccaggtcgacgag
cgggtcgaggtcgagcagatccaccagctgaaggcggtttatgcacggattctgaaggat
tatttcgggtga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (5)   
   KEGG PATHWAY (4)   
   KEGG MODULE (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (21)   

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