KEGG   Roseovarius indicus: RIdsm_05035
Entry
RIdsm_05035       CDS       T06222                                 
Symbol
pbpF
Name
(GenBank) Penicillin-binding protein F
  KO
K05367  penicillin-binding protein 1C [EC:2.4.99.28]
Organism
rid  Roseovarius indicus
Pathway
rid00550  Peptidoglycan biosynthesis
rid01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:rid00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    RIdsm_05035 (pbpF)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01003 Glycosyltransferases [BR:rid01003]
    RIdsm_05035 (pbpF)
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:rid01011]
    RIdsm_05035 (pbpF)
Enzymes [BR:rid01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.99  Transferring other glycosyl groups
    2.4.99.28  peptidoglycan glycosyltransferase
     RIdsm_05035 (pbpF)
Glycosyltransferases [BR:rid01003]
 Polysaccharide
  Bacterial polysaccharide (excluding LPS)
   RIdsm_05035 (pbpF)
Peptidoglycan biosynthesis and degradation proteins [BR:rid01011]
 Peptidoglycan biosynthesis and degradation
  Glycosyltransferase/DD-Transpeptidase (Class A PBP)
   RIdsm_05035 (pbpF)
SSDB
Motif
Pfam: Transgly Transpeptidase BiPBP_C
Other DBs
NCBI-ProteinID: QEW29193
UniProt: A0A0T5PEY1
Position
5176057..5178102
AA seq 681 aa
MRADRLLLALALVLFTAGLGRDTFDRWVDATQLPVLVTETSTEMRDRNGDLLRLYTVEDG
RWRLSVGPDAVDRRYIDMLIGYEDKRFFQHAGVDPRAILRAVGQALWHGEVVSGGSTLTM
QAARLLEDSGTGQLSGKLRQIRVALALERRLSKDRILQIYLTRAPFGGNLEGVRAATLAY
FGKEPKRLTAAEAALLVALPQSPEARRPDRNRQAAGDARDRVLERLGGADILSESEITAA
YSEPVPFARKPFPALAPHLTDLALAESPVAPRHTLTLDRTLQQSVESLAKDSLRTLPEGV
SVALVIADHRSGEILASVGSASYASGDGRQGYVDMTRALRSPGSTLKPLVYAMGFDRGLA
HPQTLINDRPVAFGSYAPQNFDGAFRGELSVTDALRQSLNIPVILLLNEIGPAHLMDALR
KSGLAPELPGDQPGLAVALGGVGVTLTDLVQLYAMLANEGRTRPLHWHDSPPTTPIHNVI
SRSAAWQVGDILAGLTPPPGAPRGRIAYKTGTSYGHRDAWAVGFDGAHVAGVWIGRADGT
PVPGAFGGDLAAPILFEAFQRLKPEADPLPPPPPETLIVSTAELPQPLKRFTGREAVFRP
DEDAPKLVFPPSGARLPVDGIGLAVKLRDGTPPFTWMANGAAVLTGIHRRDTVLNGLSRG
YSTLSVIDAEGRADRVTVWID
NT seq 2046 nt   +upstreamnt  +downstreamnt
atgagggctgaccgcctcctccttgcgctcgcgctcgtgctttttaccgcaggcttgggc
cgtgacacgttcgaccgctgggtcgatgccacccaactgcccgtgctggtcaccgaaacc
tcgaccgaaatgcgcgaccgcaacggcgacctccttcgcctctacaccgtggaagacggc
cgctggcgcctgtcggtcggccccgatgccgtcgaccgccgctatatcgacatgctcatc
ggctacgaggacaagcgtttcttccagcacgccggcgtcgacccccgcgccatactccgc
gcggtggggcaggcgctctggcacggcgaggttgtctccggcggctccacccttaccatg
caggccgcccgcctgctcgaagacagcggcaccggccagctttccggcaagctccgccag
atccgcgtggccctcgccctcgaacggcggctttccaaggaccgcatcctccagatctac
ctcacccgcgcacccttcggcggcaacctcgaaggcgtgcgcgcggcgacgctggcctat
ttcggcaaggaaccgaaacgcctgacagcagccgaggccgccctcctcgtggcccttccc
caatcacccgaggcccgccgccccgaccgcaaccgccaagccgccggcgacgcccgcgac
cgcgttctcgaacggctcggtggcgccgacatcctctccgaaagcgagatcacagccgcc
tattccgaacccgtccccttcgcccgcaaacccttcccggccctcgccccccacctcacc
gaccttgcgctcgcggaaagccccgtcgccccgcgccacacgctcaccctcgaccgcacc
ctgcaacaaagcgtggaatccctcgccaaggacagcctgcgcaccctgcccgaaggtgtc
tccgtcgccctcgtcatcgccgaccaccgctcgggcgagatcctcgcctccgtcggctcc
gccagctacgcctcgggcgacgggcggcaaggctatgtcgacatgacccgcgccctgcgc
tcgcccggctcgaccctgaagccgctggtctacgccatgggcttcgaccgtggcctcgcc
cacccccagacgctcatcaacgaccgccccgtcgccttcggcagctacgccccgcagaac
ttcgacggcgccttccggggcgagctttccgtcaccgacgccctgcgccagtcgctcaac
atccccgtcatcctgcttttgaacgagatcgggcccgcgcacctcatggacgccctgcgc
aaatccgggctcgcccccgaactccccggcgatcagcccggcctcgccgtcgccctgggc
ggtgtcggcgtcaccctcaccgaccttgtccaactctacgccatgctcgccaacgagggc
cgaacccgccctctccactggcacgacagcccgccgacaacgcccatccacaacgtcatc
agccgctccgccgcatggcaggtcggcgacatcctcgcaggcctcacgccgccccccggc
gcaccgcgcgggcgcatcgcctacaagaccggcacctcctatggccatcgcgacgcatgg
gcggtgggcttcgacggcgcacatgtcgccggcgtctggatcggccgtgccgatggcacg
ccggtgcccggcgccttcggcggcgacctcgcggcgcccatccttttcgaagccttccag
cgcctcaagcccgaggccgaccccctgccgccgcccccgcccgaaaccctcatcgtctcg
acggccgaactcccccagcccctcaagcgcttcaccgggcgcgaggccgtcttccgcccc
gacgaggacgcgcccaagctggtcttcccgccctccggtgcgcgcctgccggtcgacggc
atcggccttgccgttaagctccgcgatggcacgccgcccttcacctggatggccaacggc
gccgccgtcctcaccggcatccaccgacgcgataccgtgctgaacgggctgtcgcggggc
tactccaccctctcggtgatcgacgccgagggccgcgccgacagggtcactgtctggata
gactag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (14)   

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