KEGG   Candidatus Riesia sp. GBBU: AOQ88_00705
Entry
AOQ88_00705       CDS       T04782                                 
Name
(GenBank) DNA polymerase III subunit epsilon
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
rig  Candidatus Riesia sp. GBBU
Pathway
rig03030  DNA replication
rig03430  Mismatch repair
rig03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rig00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    AOQ88_00705
   03430 Mismatch repair
    AOQ88_00705
   03440 Homologous recombination
    AOQ88_00705
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rig03032]
    AOQ88_00705
   03400 DNA repair and recombination proteins [BR:rig03400]
    AOQ88_00705
Enzymes [BR:rig01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     AOQ88_00705
DNA replication proteins [BR:rig03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     AOQ88_00705
DNA repair and recombination proteins [BR:rig03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     AOQ88_00705
SSDB
Motif
Pfam: RNase_T Rv2179c-like DNA_pol_A_exo1 RNase_H_2
Other DBs
NCBI-ProteinID: ARC54781
UniProt: A0A1V0HPX2
Position
158431..159141
AA seq 236 aa
MNKKRQIFLDTETTGINKNGIHYIGHSIIEIGAIETIDRKITGKYFHTYIKPNRKVEVEA
FKIHKISNEFLSNKPTFYEISNKFLKFIINSEIIIHNAKFDVGFINYEFSKLNKNFKKIE
EICIITDTLSLAKKKFPGKRNSLDALCDRYEIDKSKRVSHSALIDAELLCKVYMVMTGGQ
IQFNFPKKNDSKFSKKFFRKNQEHSRVKLKILYASKEELLEHEKYLKLIKNRKNLV
NT seq 711 nt   +upstreamnt  +downstreamnt
atgaataaaaaaagacaaatatttttagatacagaaactactggaataaacaaaaatggt
atacattatattggacatagtattattgaaattggagctatagagactatagacagaaag
ataacaggtaaatattttcacacatacattaagccaaatcgaaaagtagaagttgaagcg
tttaaaattcataaaattagtaatgaatttttatcaaataaacctacattttatgaaata
tcaaataaatttttaaaatttattataaactctgaaattattattcataatgctaagttt
gatgttggatttataaattacgagttctctaaactaaataaaaattttaaaaaaatagaa
gaaatatgcattattacagatactttaagtttagcaaaaaaaaaatttccagggaaaaga
aacagtcttgatgccttatgtgatagatatgaaatagataaatctaaaagggtttcacac
agtgctcttatcgacgcagaattattatgtaaagtatacatggtaatgacaggaggacaa
attcaatttaatttcccaaaaaaaaatgattcaaaattttccaaaaagtttttcagaaaa
aatcaagaacattcacgagtaaagctaaaaattttatatgcaagtaaggaagaattacta
gaacatgaaaagtatctcaaacttattaaaaacagaaaaaatcttgtttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (17)   

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