KEGG   Rhizobium indicum: FFM53_033985
Entry
FFM53_033985      CDS       T07009                                 
Name
(GenBank) ABC transporter substrate-binding protein
  KO
K02035  peptide/nickel transport system substrate-binding protein
Organism
rii  Rhizobium indicum
Pathway
rii02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:rii00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    FFM53_033985
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:rii02000]
    FFM53_033985
Transporters [BR:rii02000]
 ABC transporters, prokaryotic type
  Peptide and nickel transporters
   Peptides/nickel transporter
    FFM53_033985
SSDB
Motif
Pfam: SBP_bac_5 DB_JBP1
Other DBs
NCBI-ProteinID: QKK21407
Position
pPR12A204:137354..138988
AA seq 544 aa
MVTFTRRGALGLATGVASSLILPRFSIAQADNRPSITIAVQKISNSNTLDTLREQSNVGQ
RIFNSSLWESLIGLDWLGNLSAVPSLATEWRRIDDKTVELKLRQGVKFHNGDEMTAEDVA
FSFSKERMFGDTQPSTGKTIFVTEKNPLGRESKELPVEIPAVARRIWPALLGVEIVDKYT
VRFVNGSPDVTMEGRISVAASAIANRRAWDEAKSYLDWARAPITTGPYRVAEFKPDTYLI
YEAHDEYWGGRPPVKQIRFVEVPEVASRVNGLLSGEYHLASDIPPDQIEGIEKNAAFEVQ
GGIITNHRLTVFDKTHAQLGNPLVRRAFTHAIDRQAIVDSLWAGRTRVPAGLQWDFYGDM
LVKDWTVPEYNPDLARQLLKEANYKGDPIPYRLLNNYYTNQTPTAQILVEMWAQVGLNVQ
IEMKENWQQILEKTPTRAVRDWSNSASFPDPVSSIVAQHGPNGQQQQVGEWTNAEMNTLS
TFLETSTDRAKRHDAFARMLQICEREDPAYTVLHQNAVFTAKSKSINWKAASAFAMDFRQ
GNWS
NT seq 1635 nt   +upstreamnt  +downstreamnt
atggtcaccttcacccgtcgcggtgctctcggccttgccaccggcgtcgccagctcgctg
atcctgccgcgtttttccatcgcccaggccgacaaccgtccttccatcaccatcgccgtc
cagaagatctcgaactcgaacacgctggatacgctgcgcgaacagtcgaatgtcggccag
cgcatcttcaattcgtcgctctgggaaagcctgatcggcctcgactggctcggcaacctc
tcggccgttccgtcactcgccaccgaatggcgccgtatcgacgacaagaccgtcgagctg
aaactgcgccaaggcgtcaaattccacaatggcgacgagatgacggccgaagacgtcgcg
ttctccttcagcaaggaacgcatgttcggcgatacgcagccgagcaccggcaagacgatc
ttcgtcaccgaaaagaacccgctcggccgcgaaagcaaggaactgccggtcgaaattccg
gccgtcgcccgccgtatctggccggccctgctcggcgtcgaaatcgtcgacaaatacacc
gtccgcttcgtcaacggttcgcctgacgtgacgatggaaggccgcatctccgttgccgcc
agcgccatcgccaaccgccgcgcctgggacgaagccaaaagctatctcgactgggcccgc
gcaccgatcaccaccggtccctaccgcgtcgccgaattcaagccggatacctacctgatc
tacgaagcgcatgacgagtattggggcggccgtcctccggtgaagcaaatccgcttcgtc
gaagttccggaagtcgcctcgcgcgtcaatggcctgctgtccggcgaatatcacctcgcc
agcgacatcccgccggaccagattgaaggcattgaaaagaacgctgccttcgaagtccag
ggcggcatcatcaccaaccaccgcctgactgtattcgacaagacccatgcccagctcggc
aatccgctggtgcgccgcgccttcacgcatgccatcgaccgccaggcgatcgtcgactcg
ctctgggcaggccgcacccgcgttccggccggcctgcagtgggatttctatggcgacatg
ctggtcaaggattggaccgtgccggaatacaatcctgatctcgcccgccagctcctcaag
gaagccaattacaagggcgatccgatcccgtatcgcctgctgaacaactactataccaac
cagacgccgacggcgcagatcctcgtcgaaatgtgggcgcaggtcggcctcaacgtgcag
atcgagatgaaggaaaactggcagcagatcctcgaaaagacgccgacgcgcgccgttcgc
gactggtcgaactccgcaagcttccccgatccggtttcctcgatcgtcgcccagcacggt
ccgaacggccagcagcaacaggtcggcgagtggaccaacgccgaaatgaacacgctgtcg
accttcctcgagaccagcaccgatcgcgccaagcgtcatgacgctttcgcccgcatgctg
cagatctgcgagcgcgaagaccccgcctataccgttctccaccagaacgccgtcttcacc
gccaagtcgaagtcgatcaattggaaggccgcatcggccttcgccatggacttccgccag
ggcaactggtcctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (2)   
   Pfam (2)   
All databases (8)   

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