KEGG   Roseburia intestinalis M50/1: ROI_03480
Entry
ROI_03480         CDS       T02598                                 
Name
(GenBank) Transcriptional regulators
  KO
K05499  LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
rim  Roseburia intestinalis M50/1
Brite
KEGG Orthology (KO) [BR:rim00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rim03000]
    ROI_03480
Transcription factors [BR:rim03000]
 Prokaryotic type
  Helix-turn-helix
   LacI family
    ROI_03480
SSDB
Motif
Pfam: Peripla_BP_3 Peripla_BP_1 LacI Peripla_BP_4 HTH_10 HTH_23 Peripla_BP_6 HTH_3 Sigma70_r4_2 HTH_38 HTH_Tnp_ISL3 HTH_24 Fe_dep_repress Sigma70_r4 HTH_36 HTH_11 HTH_7 MarR_2 Phage_terminase
Other DBs
NCBI-ProteinID: CBL07658
UniProt: D4KLA6
Position
complement(327319..328338)
AA seq 339 aa
MATIKDIATRLGVSVSTVSKGLNGASDISEELRQMVLDTAVEMGYATKKSKKKENRKLAV
FIENMEYETEDQFGYDIVLGFKQNAFRHNWDVTVIPVTPAFQLTEKYDTYMLKNGFCGAF
LVGFALHDEWMQQLSHTTMPTVLFDNYIEKNPNVCYVGTDNYEGIDAAVDHLYTLGHKKI
AFLNGSLHSMVSEQRQEAFYNSMKAHGLTVDEKLTAYGYYVADSAKYHVPTFLGAGATAI
ICGNDLIASGVIAECKLRGFRVPEDISVVGFDDLPLSASLEPPLTTVRQERNELGKCAYV
VLNSLVHHIPFCRTQIRARLNERESTARCPAAPEIKPLA
NT seq 1020 nt   +upstreamnt  +downstreamnt
atggcaacaatcaaagatattgcaacaagactcggtgtttccgtcagtaccgtatcaaaa
ggtttaaatggcgcgagtgacatcagcgaagaattacgtcagatggtgcttgacactgca
gttgaaatgggatacgcaacaaaaaaatcaaagaaaaaagaaaaccgcaaactggcggtt
tttatcgaaaatatggaatatgaaacggaagatcagtttggctacgatatcgtactcggt
ttcaaacagaatgctttccgccataattgggatgtcaccgttattccggtcacacctgct
tttcagcttacagaaaaatatgatacatacatgttaaagaacggtttctgcggtgccttt
ttagtcggattcgccctgcatgacgaatggatgcaacagctttcccacaccacaatgccg
actgttctctttgataactatatcgaaaaaaatccgaacgtctgctacgtcggcaccgat
aactatgagggcatcgacgcagccgtagatcatctttatacgctcggccacaaaaaaatt
gctttcttaaacggttccctgcactccatggtatccgagcagcgccaggaagcattttat
aacagcatgaaagctcacggactgactgttgatgagaagctgaccgcctacggctattat
gtggcagacagcgcaaagtatcacgtcccgacgtttctcggcgcaggtgcgactgcgatc
atctgcggcaacgatctgattgcttccggtgtgatcgctgagtgtaagctgcgcggtttc
cgtgttccggaggatatcagcgttgtcggttttgatgacctgccgctctctgcctcctta
gagccgccgcttaccacggttcgtcaggagcgcaatgagcttggaaaatgcgcttacgtc
gttttaaattctctggtgcaccacatcccgttctgccggacgcagatccgcgccagactc
aacgagagagagtcgacggcacgctgtccggcggcgccggagatcaaaccgctggcttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (19)   
   Pfam (19)   
All databases (26)   

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