KEGG   Candidatus Riesia pediculicola: RIEPE_0505
Entry
RIEPE_0505        CDS       T01218                                 
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
  KO
K06173  tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
Organism
rip  Candidatus Riesia pediculicola
Brite
KEGG Orthology (KO) [BR:rip00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:rip03016]
    RIEPE_0505 (truA)
Enzymes [BR:rip01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     RIEPE_0505 (truA)
Transfer RNA biogenesis [BR:rip03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    RIEPE_0505 (truA)
 Prokaryotic type
    RIEPE_0505 (truA)
SSDB
Motif
Pfam: PseudoU_synth_1
Other DBs
NCBI-ProteinID: ADD79574
UniProt: D4G8T3
Position
480539..481306
AA seq 255 aa
MKNRVALGIQYDGSRYHGWQKQKNGLDSIQKRLESSLKKLTDEDIKTYCGGRTDSGVHAF
GQVVHFETYKIRKDVVWVSGVNHFLPKDISVLWVKPVSHRFHARFSAISRHYRYLIFNKE
IRPAIFRSNVLHISKKLDYKDMNKAAQCLLGENDLISFISFDRRSFRSTKRNIRYINVKR
FDSYVIIDIVANSFAYNMVRNIVGSLIEVGLGKKGTEWIKKLIDLKDRTKSGPKVHSKGL
YLMHINYSKEFNLPS
NT seq 768 nt   +upstreamnt  +downstreamnt
atgaaaaatagagttgcacttggaatacagtatgacggaagtcgatatcatggatggcaa
aaacaaaaaaacggattggatagtatacagaaacgtttagagagctctttaaaaaaattg
accgatgaagatattaaaacatattgcggaggaagaactgattctggagtgcatgcgttc
gggcaagtggttcattttgaaacttataaaatccgaaaggacgtcgtatgggtttcagga
gttaatcattttttgccaaaagatatatcggttctttgggtaaagcccgtttctcatcga
tttcatgctagattcagtgcaatttctaggcactatcggtatctgatttttaataaagag
attcgtccagcaatatttcgatcgaatgttcttcatatttctaagaaactagattataaa
gatatgaataaagctgctcaatgtttattgggagaaaatgatttgatttccttcatttcc
tttgatcgtcgttcatttagatccactaaaagaaatattcgatatataaacgtaaaaagg
tttgatagttatgttattattgacattgtggcgaattcattcgcttacaatatggtcagg
aatatcgtcgggagtttgatcgaagtgggtttaggaaaaaaaggaacagaatggataaaa
aaactgattgacttaaaggatagaacaaaatcaggtcctaaagtacattcaaaaggtcta
tatttgatgcacataaattactcaaaagaattcaatcttcctagttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (21)   

Download RDF
DBGET integrated database retrieval system