KEGG   Agrobacterium pusense IRBG74: BN877_I0267
Entry
BN877_I0267       CDS       T02867                                 
Name
(GenBank) putative exonuclease VII, large subunit OB-fold nucleic acid binding domain
  KO
K03601  exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
Organism
rir  Agrobacterium pusense IRBG74
Pathway
rir03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:rir00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    BN877_I0267
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rir03400]
    BN877_I0267
Enzymes [BR:rir01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.6  exodeoxyribonuclease VII
     BN877_I0267
DNA repair and recombination proteins [BR:rir03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     BN877_I0267
SSDB
Motif
Pfam: Exonuc_VII_L tRNA_anti_2 tRNA_anti-codon RecJ_OB Gly_transporter
Other DBs
NCBI-ProteinID: CDI07182
UniProt: U4PPS5
Position
262455..264053
AA seq 532 aa
MSDIFSHAALSNLAEFSVSELSGSIKRTVETAFEQVRVRGEISGYRGPHSSGHAYFSLKD
DRARIDAVIWKGTFSRLKFRPEEGMEVIATGKITTFPGSSKYQIVIENLEPAGAGALMAL
LEDRRRRLAAEGLFDPARKRRLPFMPRVIGVVTSPTGAVIRDILHRISDRFPVHVVVWPV
KVQGEGSGEEVANAIRGFNALQPGGEIARPDVMIVARGGGSLEDLWSFNDEIVVRAAAES
EIPLISAVGHETDTTLIDYAADVRAPTPTGAAEMAVPVRAELEAQLSGLAARLSGSVLRQ
MDNRRQGVRALVRALPSLDQLLALPRRRFDEAASGLGRGLEITALNKRRAFERSASGLRP
ETLLNGLKHHRQRITERMHRAETLVERRLLQGKGRVDAFDSALRSLPARLLGQLERQKER
VVTASRRADTAVLHRMAQNRSGLAAHDRILQSLSYKNVLNRGYAVIRDDENRPLTRAAAI
ASGAVVSMEFADGRVSAITTGEGTPSPDTPVALKKKTVKPASSDPGNQGSLF
NT seq 1599 nt   +upstreamnt  +downstreamnt
atgagcgatatcttctcccacgccgcattgagcaatcttgccgaattctcggtctccgaa
ctgtcgggctccatcaaacgcacggtggagacggcgttcgaacaggtgcgggtgcggggc
gaaatttctggttatcgtgggccgcattcgtcaggacacgcctatttctcactgaaggat
gatcgtgcccgcatcgatgcggtgatctggaagggcaccttctcgcggctgaaattccgc
ccggaagagggcatggaagtcatcgccaccggcaagatcaccacctttcccggttcctcg
aaatatcagatcgtcatcgaaaaccttgagcctgccggcgccggcgcgctgatggcgctt
ttggaagatcgccgccggcggctggcggcggaagggctgttcgatccggcccgcaagcgc
cgcctgcctttcatgccgcgcgtcattggagttgtgacctcgccaacgggcgcggtcatc
cgcgatattctccaccgcatttcggatcgtttcccggtccatgtcgtcgtctggccggtc
aaagtgcagggcgaaggctcgggtgaggaggtggcgaacgccattcgcggcttcaacgcg
cttcagcccggcggcgagattgcccgccccgatgtaatgatcgttgcgcgcggcggcggc
agcctcgaagacctctggagcttcaatgacgaaatcgtcgtgcgcgccgctgccgagagc
gaaatcccgctgatttccgccgtcggacacgagaccgatacgacattgatcgattatgcc
gccgacgtgcgcgccccgacgccgacgggagccgccgaaatggcagtgccggtgcgggcg
gaactcgaagcgcagctgtcgggcctcgctgcccgcctttccggttcggtcttgcggcag
atggacaatcgccgtcaaggcgtgcgggcgctggtgcgcgcgctgccttcgctcgatcag
cttcttgctttgccgcgccgccggttcgacgaggccgcgagcggtctcggtcgcggattg
gaaataacagccctcaacaagcgccgtgccttcgaacgttctgcctcgggtctcagaccg
gaaaccctgttgaacggtctcaaacaccacaggcagcggattactgaacgtatgcaccgg
gctgagaccctggtggaacgccgcctgttgcagggcaagggccgcgttgatgctttcgat
tccgcgttgcgttcgctccctgcccgacttctcggccagctggagcggcagaaggaacgc
gtcgtcaccgcgtctcgccgcgccgataccgccgtgttgcatcgcatggcgcagaaccgt
tccggtctcgccgcccatgatcgtatcctgcaatcgctgtcctataagaacgtgctgaat
cgcggttatgcggtgatccgcgatgatgagaaccggccgctgactcgtgctgcggctatc
gcgtcaggcgctgtcgtctctatggaatttgccgacggtcgcgtctccgccatcacaacg
ggagaggggacgccgtccccggatacgcccgtcgcgttgaaaaagaagacggtcaaaccg
gcttcttcggaccctggcaaccagggcagcctgttctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

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