KEGG   Agrobacterium pusense IRBG74: BN877_I2717
Entry
BN877_I2717       CDS       T02867                                 
Symbol
lpdA2
Name
(GenBank) dihydrolipoamide dehydrogenase, FAD/NAD(P)-binding, component of the 2-oxoglutarate dehydrogenase and the pyruvate dehydrogenase complexes
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
rir  Agrobacterium pusense IRBG74
Pathway
rir00010  Glycolysis / Gluconeogenesis
rir00020  Citrate cycle (TCA cycle)
rir00260  Glycine, serine and threonine metabolism
rir00280  Valine, leucine and isoleucine degradation
rir00310  Lysine degradation
rir00380  Tryptophan metabolism
rir00620  Pyruvate metabolism
rir00630  Glyoxylate and dicarboxylate metabolism
rir00640  Propanoate metabolism
rir00785  Lipoic acid metabolism
rir01100  Metabolic pathways
rir01110  Biosynthesis of secondary metabolites
rir01120  Microbial metabolism in diverse environments
rir01200  Carbon metabolism
rir01210  2-Oxocarboxylic acid metabolism
rir01240  Biosynthesis of cofactors
Module
rir_M00009  Citrate cycle (TCA cycle, Krebs cycle)
rir_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rir_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
rir_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:rir00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    BN877_I2717 (lpdA2)
   00020 Citrate cycle (TCA cycle)
    BN877_I2717 (lpdA2)
   00620 Pyruvate metabolism
    BN877_I2717 (lpdA2)
   00630 Glyoxylate and dicarboxylate metabolism
    BN877_I2717 (lpdA2)
   00640 Propanoate metabolism
    BN877_I2717 (lpdA2)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    BN877_I2717 (lpdA2)
   00280 Valine, leucine and isoleucine degradation
    BN877_I2717 (lpdA2)
   00310 Lysine degradation
    BN877_I2717 (lpdA2)
   00380 Tryptophan metabolism
    BN877_I2717 (lpdA2)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    BN877_I2717 (lpdA2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rir04147]
    BN877_I2717 (lpdA2)
Enzymes [BR:rir01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     BN877_I2717 (lpdA2)
Exosome [BR:rir04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   BN877_I2717 (lpdA2)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 NAD_binding_8 FAD_binding_2 FAD_oxidored GIDA Lys_Orn_oxgnase HI0933_like AlaDh_PNT_C Thi4 FAD_binding_3 DAO 3HCDH_N
Other DBs
NCBI-ProteinID: CDI09601
UniProt: U4QAM4
Position
complement(2621306..2622712)
AA seq 468 aa
MAYDVVVIGTGPGGYVCAVKAAQLGLKVAVIEKRATYGGTCLNVGCIPSKALLHASETFA
HVAHGVDSLGIEVPAPKLNLEKMMAHKDGVVKANVDGVSFLFKKNKIDAFQGTGKVVSAG
KVSVTNDKGETQEIEAKNIVIATGSDVAGIPGVQVDIDESVIVSSTGAIALSKVPEKLIV
VGGGVIGLELGSVWSRLGAKVTVVEYLDNILGGMDAEVSKQAQRLLAKQGLDFKLGAKVT
AVEKTAAGAKVVFEPVKGGAAETLEANVVLISTGRKPYTEGLGLAEAGVVLDSRGRVEID
GHYKTNVDGIYAIGDVVKGPMLAHKAEDEGVALAEILAGQRGHVNYDVIPAVVYTQPEVA
SVGKTEEELKAAGVAYKVGKFPFTANGRARAMQVTDGFVKILADKETDRVLGGHIVGFGA
GEMIHEITVLMEFGGSSEDLGRTCHAHPTMSEAVKEAALATFFKPIHM
NT seq 1407 nt   +upstreamnt  +downstreamnt
atggcatatgatgtagttgtaatcggcaccggccccggcggttatgtttgcgcggtcaag
gcggcgcagctgggcctcaaggtcgctgtcatcgaaaagcgcgcgacctatggcggcaca
tgcctcaatgtcggctgcattccctccaaggcgctgctgcacgcgtccgaaaccttcgcg
catgttgcccatggtgtcgactcgctcggcatcgaagttccagcgcccaagctgaacctt
gaaaaaatgatggcgcacaaggacggcgtggtgaaggccaatgtcgatggcgtttccttc
ctgttcaagaagaacaagatcgatgctttccagggcaccggcaaggttgtgtcggccggc
aaggtttccgtcaccaacgacaagggcgagacacaggaaatcgaagcaaagaatatcgtc
atcgccacgggttctgacgttgccggcattccgggtgttcaggttgatatcgatgaaagc
gtcatcgtgtcctccaccggcgcaatcgctctctccaaggttccggaaaagctgatcgtt
gtcggtggcggcgtcatcggccttgaactcggttcggtctggtcgcgtctcggcgccaag
gttaccgtcgtcgaatatctcgacaacattctcggcggcatggatgccgaagtttccaag
caggcgcagcgtctgctcgccaagcagggcctcgatttcaagctcggcgcaaaggtaacg
gctgttgaaaaaaccgctgccggcgccaaggtcgtgttcgagccggtcaagggcggcgct
gccgaaacgctggaagcaaacgtcgtgctgatctccaccggccgcaagccctacaccgaa
ggtctcggccttgccgaagctggtgtcgtgcttgacagccgtggccgcgttgaaatcgac
ggccactacaagaccaatgtcgatggcatctatgcgatcggcgacgtggtgaagggcccg
atgctggcgcacaaggcggaagacgagggtgttgcgcttgcggaaatccttgccggccag
cgcggtcacgtgaattacgacgtcattccggcagtcgtttacacgcagccggaagtggct
tccgtcggcaagaccgaagaggaactcaaggccgccggcgtcgcttacaaggttggcaag
ttccccttcaccgccaatggccgcgcccgcgccatgcaggtgacggatggtttcgtgaag
atccttgccgacaaggaaaccgaccgggttctcggcggtcacattgtcggcttcggcgct
ggcgaaatgatccacgagatcaccgtactgatggagtttggcggttcctcggaagatctc
ggccgtacctgccatgcgcacccgaccatgtcggaagccgtgaaggaagcggcattggca
acgttcttcaagccgatccacatgtga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (23)   
   KEGG PATHWAY (16)   
   KEGG MODULE (7)   
Chemical substance (27)   
   KEGG COMPOUND (27)   
Chemical reaction (11)   
   KEGG ENZYME (1)   
   KEGG REACTION (10)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (15)   
   Pfam (15)   
All databases (84)   

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