KEGG   Agrobacterium pusense IRBG74: BN877_I2784
Entry
BN877_I2784       CDS       T02867                                 
Symbol
ffh
Name
(GenBank) 4.5S-RNP protein, GTP-binding export factor, part of signal recognition particle with 4.5 RNA, ffh family
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
rir  Agrobacterium pusense IRBG74
Pathway
rir02024  Quorum sensing
rir03060  Protein export
rir03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:rir00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    BN877_I2784 (ffh)
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    BN877_I2784 (ffh)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    BN877_I2784 (ffh)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:rir02044]
    BN877_I2784 (ffh)
Enzymes [BR:rir01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     BN877_I2784 (ffh)
Secretion system [BR:rir02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   BN877_I2784 (ffh)
  Eukaryotic Sec-SRP protein
   BN877_I2784 (ffh)
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N CbiA Zeta_toxin AAA_30 AAA_33 AAA_22 AAA_19 AAA_31 DnaB_C AAA AAA_14 6PF2K APS_kinase AAA_18 Thymidylate_kin AAA_7 AAA_5 ResIII AAA_17 AAA_16 GTP_EFTU ArsA_ATPase
Other DBs
NCBI-ProteinID: CDI09668
UniProt: U4PXB4
Position
2688202..2689773
AA seq 523 aa
MFENLQDRLGSILNGLTGRGALTEADVAAALREVRRALLEADVALEVVRSFTDRVREKAV
GAAVLKSIKPGQMVVKIVHDELVEMLGTEGVSIDLHAAAPVVIMMVGLQGSGKTTTTGKI
AKRLTDRDKKKVLMASLDTRRPAAQEQLRQLGVQTGVDTLPIIAGQSPTDIAARAVQAAK
LGGHDVVILDTAGRTHIDEPLMLEMADIKKKSNPHEILLVADSLTGQDAVNLARNFDERV
GITGLVLTRMDGDGRGGAALSMRAVTGKPIKLIGIGERMNELDEFHPRRIADRILGMGDI
VSLVEKAAENIDAEKARAMAEKMAKGKFDLNDLADQLAQMKKMGGMGGIMGLMPGMAGMK
DKMASAGMNDKMFDRQIAIISSMTKAERANPDILKHSRKKRIAAGSGTDAAEINKLLKMH
RGMADMMKAMGGKGKGGIMKQMMGGLAGKMGLGGMMGGGMPDLSNIDPKQLEALQKQAEA
AGLGKPGGMPGLGGLPGGLPGLGGTKLPGLGGMPGLPGFPKKK
NT seq 1572 nt   +upstreamnt  +downstreamnt
atgtttgaaaacctccaggaccgccttggttccattctgaatggactgaccggccgtggc
gcgctgacggaagccgatgttgccgccgccctgcgcgaggttcgccgtgcgctgctggaa
gcggatgtggccttggaagtcgtacgttccttcaccgacagagtgcgtgaaaaggccgtc
ggcgcggccgttctgaaatccatcaagcccggccagatggtcgtcaaaatcgtccatgac
gagcttgtcgaaatgctcggcaccgaaggcgtctcgatcgaccttcatgcggccgccccc
gtcgtcatcatgatggtaggtctgcagggctcgggtaaaaccacaaccaccggcaagatc
gccaagcgcctgaccgaccgcgacaagaagaaggtgctgatggcatctctcgacacgcgt
cgtccggccgcccaggagcagcttcgccaactcggcgtccagaccggcgtcgacacgctg
ccgatcattgccggccagtcgccgacggatattgccgcacgtgccgtgcaggccgcaaag
ctcggcggccacgacgtcgtcattctcgataccgccggccgcacgcacatcgacgaaccc
ttgatgctggaaatggcagacatcaagaagaagtccaatccgcatgaaatcctgctggtc
gcggattctctgaccggtcaggacgccgtcaatctggctcgcaatttcgatgaacgtgtc
ggcatcaccggcctcgttctcacccgtatggacggcgacggccgcggcggtgcggccctc
tccatgcgcgccgtcaccggcaagccgatcaagctgatcggtatcggcgagcgcatgaac
gaactcgacgagttccacccgcgccgtatcgccgaccgtattctcggcatgggcgacatc
gtctcgctggtcgaaaaggccgccgaaaacatcgatgcggaaaaagcccgcgccatggcc
gagaagatggccaagggcaagttcgacctcaacgatctggccgaccagcttgcccagatg
aaaaagatgggcggcatgggcggcatcatggggctgatgcccggcatggccggcatgaag
gacaagatggcttcagccggcatgaacgacaagatgttcgatcgccagattgccatcatc
tcctccatgaccaaggcggagcgcgccaatccggatattctgaaacacagccgcaagaag
cgcatcgccgccggttccggcaccgatgccgccgaaatcaacaagcttctgaagatgcat
cgcggcatggccgacatgatgaaagccatgggcggcaagggcaaaggcggcatcatgaag
cagatgatgggcggccttgccggcaagatgggtctcggtggcatgatgggcggcggcatg
cctgatttgtccaacatcgatccgaagcagcttgaagcgctccagaagcaggcggaagcc
gccggcctcggcaagccgggtggaatgcccggccttggcggtctgccgggcggattgccg
ggcctcggaggcacaaagctgccgggtcttggcggcatgccgggccttcccggctttccg
aaaaagaagtga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (24)   
   Pfam (24)   
All databases (36)   

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