KEGG   Rivularia sp. PCC 7116: Riv7116_2452
Entry
Riv7116_2452      CDS       T02364                                 
Name
(GenBank) Holliday junction DNA helicase subunit RuvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
riv  Rivularia sp. PCC 7116
Pathway
riv03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:riv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    Riv7116_2452
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:riv03400]
    Riv7116_2452
Enzymes [BR:riv01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Riv7116_2452
DNA repair and recombination proteins [BR:riv03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     Riv7116_2452
    RecFOR pathway proteins
     Riv7116_2452
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 Mg_chelatase AAA_3 nSTAND3 AAA_14 AAA_16 Rad17 TsaE AAA_22 AAA_2 AAA_25 TIP49 AAA_18 RNA_helicase Sigma54_activ_2 bpMoxR AAA_33 AAA_PrkA AAA_24 MCM AAA_17
Other DBs
NCBI-ProteinID: AFY54962
UniProt: K9RCZ8
Position
3030950..3032059
AA seq 369 aa
MAIISSKKQPQPQEPDKEPTHLKKAAKQKADEKLLQPEAAIDEQDSNEVGIRPQQFADYI
GQKDLKDVLDIAIKAAKSRGEVLDHLLLYGPPGLGKTTMAMILASEMGVNYKITSAPALE
RPRDIMGLLVNLKPGDIIFIDEIHRLSRMTEEILYPAMEDYRLDITVGKGSSARTRSIPL
AKFTLVGATTRVGALSSPLRDRFGLVQKLRFYEVEELSQIVLRTADVLKTDVSKDGALEI
ARRARGTPRIANRLLKRVRDYAEVKSSGTINETVAAEALQLFQVDPCGLDWTDRTMLSVI
VEQFNGGPVGLDTIAAASGEDTQTIEEVYEPYLMQIGYLQRTPRGRVATPAAYKHLGFKP
PSEQLSLLS
NT seq 1110 nt   +upstreamnt  +downstreamnt
atggcgattatctcctctaaaaaacagccccagcctcaagaacctgataaagaacccact
cacctgaaaaaagctgcgaaacaaaaagcagacgaaaaacttttgcaacccgaagcagct
atagatgaacaggatagtaatgaagtcggtattcgtccacaacaatttgccgattatatc
gggcaaaaagatttaaaagatgtactagacattgcaatcaaagcagctaaatctagaggt
gaagtattagaccacctgctgctttacggtcctccaggtttgggtaaaaccacaatggca
atgattctagcatcagaaatgggagtaaattataaaattactagcgctcccgcattagaa
cgccctagagacatcatggggctgcttgttaatcttaagcctggggatattatctttatt
gacgaaattcatcgcctctctcggatgaccgaagaaattttatatccggcgatggaggat
tatcgcttagatattactgttggtaaaggttctagcgctcgcactcgtagcattccttta
gcaaaatttactttagtcggagcaacaactcgcgtcggagcgctgagttctcctttgaga
gatcgttttggcttagttcaaaaactgagattttatgaagtcgaagaactcagtcaaatt
gtgttaagaactgctgatgtactgaaaacagatgtaagtaaagatggagctttagaaatt
gcgcgtagagcgcgaggaacgccgcgtattgcgaatagattactcaagcgcgtccgggat
tatgctgaggttaaatcctctggcacaataaatgaaaccgtagccgcagaggctctacaa
ttattccaggtagacccttgcggcttagattggactgaccgcactatgttaagcgtgata
gtagaacaatttaatggcggtcctgtaggattagatacaatcgccgccgctagtggggag
gatacgcaaacgattgaagaggtatacgaaccatatttaatgcaaattggttacttacag
cggactcctcgtggtagggtagcaacacccgcagcttacaaacatttaggttttaagccg
ccaagcgaacagttatctttactttcttag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (25)   
   Pfam (25)   
All databases (40)   

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