KEGG   Rivularia sp. PCC 7116: Riv7116_5123
Entry
Riv7116_5123      CDS       T02364                                 
Name
(GenBank) 23S RNA-specific pseudouridylate synthase
  KO
K06177  tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
Organism
riv  Rivularia sp. PCC 7116
Brite
KEGG Orthology (KO) [BR:riv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:riv03009]
    Riv7116_5123
   03016 Transfer RNA biogenesis [BR:riv03016]
    Riv7116_5123
Enzymes [BR:riv01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.28  tRNA pseudouridine32 synthase
     Riv7116_5123
    5.4.99.29  23S rRNA pseudouridine746 synthase
     Riv7116_5123
Ribosome biogenesis [BR:riv03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    Riv7116_5123
Transfer RNA biogenesis [BR:riv03016]
 Prokaryotic type
  tRNA modification factors
   Psudouridine synthases
    Riv7116_5123
SSDB
Motif
Pfam: PseudoU_synth_2 Ribosomal_S6
Other DBs
NCBI-ProteinID: AFY57520
UniProt: K9RHU1
Position
complement(6418318..6420246)
AA seq 642 aa
MLLLHPLSDFIDTNSKVNNLAPTYYYQGYAADGELLQLPRTCEAELIARGLMRQLANNEI
YSREGKMYGILLVELPSGEKRILKAFSGLLNGSSIIEGWVPPILGREKVVLEENRTLAEL
EAIKQEIIQLKQLSQRQQYETIALEFEQRLQEMAKRHQVKKQQRHQKRQQLDNITNFLEY
TFTSPRSSGTPLLIKEKGKGKVETVLYSSENRYNQTAEKSHHILIILYKTLLQGKHSPKE
CRLSQSIWDYSTFFVMTIINPSLILNTELEKLKEESRQDGIERKLLKRQRDEALQPLKQV
INNADIRIRELKQQRKETSRKLQSQMHAAYTIMNFLGNSSSLQQLMPQGLPTGTGDCCTP
KLLHYAATNNLKPLAIAEFWWGKSTRDKIPGEFYGACIERCQPLMGFLLSGLKSNPSNYF
PSAEEIPIIYQDEWLIAVNKPSGLLSVPGRYHNNQDSVVSRLINLLPDCEKMTAVHRLDM
DTSGILLLAKNKQVHRLLSKQFEQRLVKKVYEAILSDYLLNKELNKEGTIELPLWGNPEN
RPYQEVNYQYGKHCITKFKVLNLSLNKKPNYTRIEFVPLTGRTHQLRIHAADKNGLNMPI
LGDKLYGSQLTQANRLYLHARELTFEHPYSGEKIYLQAETPF
NT seq 1929 nt   +upstreamnt  +downstreamnt
atgttacttcttcacccactttcagatttcatagacactaattctaaagtcaataatcta
gctcctacttattactaccagggatatgctgctgatggtgagctattacaacttccccgc
acttgtgaagcagaattaattgctcgtggcttaatgcgacaactagcaaataatgaaata
tattctcgtgaaggtaaaatgtacgggatattattagtcgaattaccaagcggtgaaaaa
agaatactcaaagcattttccgggttacttaatggcagtagtatcattgaaggttgggta
ccaccaattctaggtagagaaaaagtagttttagaagaaaatcgtactttggcagagtta
gaagctataaaacaagaaattattcagttgaaacaactttcccaaagacaacaatatgaa
actatagccttagaatttgaacaacgtttgcaagaaatggctaaacggcatcaagtaaaa
aaacagcagcgccatcaaaaacgtcagcaacttgacaatataacgaatttcctagaatac
acctttacctcaccccgctcttcaggcacccctctccttatcaaggagaagggaaaaggt
aaagttgaaactgtattgtactcaagcgagaaccgctataatcaaacggcagaaaaatcg
caccatattttaattattttatataaaacgttattgcaagggaagcattcacctaaagaa
tgtcgtttatctcaaagtatttgggattattccactttttttgtcatgacaatcattaac
ccaagcttgatattaaatacagaattagaaaaacttaaagaagaaagccgtcaagatggg
attgaacgaaagctactcaaacgacagcgcgatgaagctttacagccgctaaagcaggta
attaataatgcagatatacgcattcgggaattaaagcagcagcgtaaggaaacatcccgc
aagctacaatcacagatgcacgcagcttatacaatcatgaattttttgggtaattcctca
agtttacagcaattaatgcctcaaggcttacccaccggtacgggagattgctgtactccc
aaattacttcattatgctgcaactaataacctcaaaccattagcgatcgccgagttttgg
tgggggaaatcaactcgggataaaataccgggagaattctacggtgcttgtatcgaacgc
tgtcaaccattaatgggttttctattgtcgggtttaaaatcaaatccgtctaactacttt
cctagtgcggaagaaattccgattatctaccaagacgaatggttaattgccgtgaataaa
ccatctggtttgctatctgttcccggaagataccataacaatcaagatagtgttgtcagt
cgtctaattaatttattacccgattgcgaaaaaatgacagcggtacatcggttggatatg
gatacttctggtattttactgctagcaaaaaataaacaagttcaccgtttattaagcaag
caattcgagcaaagactggtgaaaaaagtttatgaagcaatcctctcagattatttatta
aataaggaattaaataaagaaggtacgattgaactcccattatggggaaatcccgaaaat
cgtccttaccaagaagtgaattatcaatatggcaagcattgtataaccaaattcaaagtt
ttaaatttaagtttaaataaaaaaccaaattacactcgtatcgaatttgttcctttaact
ggaagaactcatcaactaagaattcatgccgccgataaaaatggtttaaatatgcctatt
cttggggataagctttatggcagccaattaacacaagcaaatcggctgtatcttcacgcc
agggaactcacatttgagcatccgtattcgggagaaaaaatatatttgcaagcagaaaca
ccgttttaa

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (28)   

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