KEGG   Roseburia intestinalis XB6B4: RO1_05580
Entry
RO1_05580         CDS       T02597                                 
Name
(GenBank) Endonuclease IV
  KO
K01151  deoxyribonuclease IV [EC:3.1.21.2]
Organism
rix  Roseburia intestinalis XB6B4
Pathway
rix03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:rix00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    RO1_05580
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rix03400]
    RO1_05580
Enzymes [BR:rix01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.2  deoxyribonuclease IV
     RO1_05580
DNA repair and recombination proteins [BR:rix03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     RO1_05580
SSDB
Motif
Pfam: AP_endonuc_2
Other DBs
NCBI-ProteinID: CBL11307
UniProt: D4KVB7
Position
548319..549158
AA seq 279 aa
MRIDMLIGNHLSASKGYAAMGKAALALDANTFAFFTRNPRGGKAKEIDEKDVEKFLNFAK
EHEFGKIVAHAPYTMNLCAAKEDVRSFSKEMLLDDLKRMEYTPYNYYNFHPGSHVGQGAE
KGIVLIAEALNEALKPEQTTTVLLETMAGKGTEVGRTFEELREILDRVELNDKMGVCLDT
CHVWDGGYDIVNDLDGVLNEFDRVIGLDRLKAVHFNDSMNDCGSHKDRHAKIGEGKIGAE
AMRRVALHPLLEGRPFILETPNDDEGYRREIQMVREWTR
NT seq 840 nt   +upstreamnt  +downstreamnt
atgaggattgatatgttaataggaaatcatttatccgcatccaaaggatatgcggcgatg
ggaaaggcagcgctggcgttagatgccaatacctttgctttttttacaagaaatccgcgt
ggcggtaaggcaaaagaaatcgatgaaaaagatgtggaaaagtttttaaattttgcgaag
gagcacgaatttggaaagattgttgcgcatgcgccatatacgatgaacctctgcgctgca
aaagaggatgtccgttctttttcaaaggaaatgctgcttgatgacttaaaacgcatggag
tatacaccgtacaattattataattttcatccgggttcccatgtgggacaaggggcggaa
aaagggatcgtattgattgcggaagcattaaatgaagccttgaaaccggagcagacaacg
accgttttacttgagacgatggcgggaaaaggaactgaggttggaagaacgtttgaggaa
ttaagagaaatcttagaccgtgtggaattaaacgataaaatgggagtctgcctcgatacc
tgccatgtgtgggatggcggttatgacattgtaaacgaccttgacggtgtgttaaatgag
tttgaccgtgtgatcgggctcgaccggctgaaggcagttcactttaatgacagcatgaac
gactgtggctcccacaaggaccgtcatgcgaagatcggtgagggaaagatcggtgcagag
gcgatgcggcgcgttgcattgcacccgcttttagaaggaagaccgtttatcttagagaca
ccgaacgatgatgaggggtacagacgggagatacagatggtccgggagtggacgcggtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

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