KEGG   Rickettsia japonica: RJP_0785
Entry
RJP_0785          CDS       T01637                                 
Symbol
mutM
Name
(GenBank) formamidopyrimidine-DNA glycosidase
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
rja  Rickettsia japonica
Pathway
rja03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:rja00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    RJP_0785 (mutM)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rja03400]
    RJP_0785 (mutM)
Enzymes [BR:rja01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     RJP_0785 (mutM)
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     RJP_0785 (mutM)
DNA repair and recombination proteins [BR:rja03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     RJP_0785 (mutM)
SSDB
Motif
Pfam: Fapy_DNA_glyco H2TH zf-FPG_IleRS NFACT_N Ribosomal_S13
Other DBs
NCBI-ProteinID: BAK96982
UniProt: G4KL90
Position
983809..984630
AA seq 273 aa
MPELPEVETLKNSLKDKLIGLIIENVELKRDNLRYKLSTLLATEILNTNILDVRRRAKYL
IIDFNNDYSLIVHLGMSGRLTLQSANYKTQKHDHVIFDLSNGEKLIFNDTRRFGMIYSFK
TDLLEKEFFNDLGIEPFSDLLTLEYLKDKLQTKKIPIKNLIMDNRVVVGVGNIYASESLH
LARIHPDKSGSDLRDDEIENLIKSIRDVLTKAITAGGTTLKDFVNGDNKPGYFTQQLTVY
GREGQSCLSCSSTIIKTKHSGRSTFYCKTCQYS
NT seq 822 nt   +upstreamnt  +downstreamnt
atgccggaacttcctgaagtagaaactcttaaaaactctctaaaagataagctaatcggg
cttattatagaaaatgtagagttaaaaagagataatttacgttataagctatccacgctt
ttagctacagaaatcttaaatactaatatactggatgttaggcgtcgtgcaaaatattta
attatagattttaataatgattattctttaatagttcatctaggcatgagcggtagactt
actctgcaatctgctaattataaaactcaaaaacacgatcatgtgatttttgatttaagt
aacggcgaaaagttaattttcaacgatactagacgattcggtatgatttatagttttaag
actgatctcttagaaaaagaattttttaatgatttaggcatagagcctttttctgattta
ttgacgttagaatatctaaaagataagctacaaactaaaaaaataccaataaaaaacttg
attatggataatagagttgtagtcggagtcggtaatatctatgcttccgaaagtcttcat
ttagctagaattcatccggataaatcaggtagcgatttaagggatgatgaaatagaaaat
ttaattaaatcgattagagatgtgttaactaaagctataactgccggcggtactactctt
aaagattttgtaaacggcgataacaaacctggttattttactcagcaacttacggtttac
ggtagagagggacaaagttgtttaagctgctctagcactattatcaagacaaaacattca
ggcagaagtactttttattgtaaaacttgccaatatagttaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (16)   

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