KEGG   Rhizobium leguminosarum bv. trifolii WSM1689: RLEG3_09680
Entry
RLEG3_09680       CDS       T03009                                 
Name
(GenBank) ATP-dependent DNA ligase
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
rlb  Rhizobium leguminosarum bv. trifolii WSM1689
Pathway
rlb03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:rlb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    RLEG3_09680
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rlb03400]
    RLEG3_09680
Enzymes [BR:rlb01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     RLEG3_09680
DNA repair and recombination proteins [BR:rlb03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     RLEG3_09680
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_C RNA_ligase
Other DBs
NCBI-ProteinID: AHF87422
Position
unnamed:607853..608896
AA seq 347 aa
MTRPRRPILPLLDESHSTLQSRPIRKRNPDQPSLPFDPMPSRIEPCLALLKPTVPVGPDW
LYEVKLDGYRLAMHIEPKGVRVITRGGHDWTHRFPTIAAAAKELGVTTAILDGEAVVLDE
HGRSDFGALQRSLGGRGGKRVSTEAILVAFDLLYLDGHDLTGTELDVRRHLLEDLMPDGD
DQNIRLSEEIELPAEDLLEHACHHHLEGIIAKHRDWPYRSGRTGDWLKIKCVQSESFMIV
GYEQSASARGGIGSLLLAGRRGLDWIYVGSVGTGFTASDAEFLKKTLDRLKTSQPVVPLK
GKRLVLVQPTLIAEIEFRGWTDDGNLRHASYKGLREVQDNAAVFDMS
NT seq 1044 nt   +upstreamnt  +downstreamnt
atgacgcgcccgcgccgcccaattctgcccttgctcgacgagtctcactcaaccctgcag
tctcgtccgatccgcaagcgcaatcctgaccagcccagtctgcccttcgatccaatgccg
tcgcgcatcgagccttgcctcgcactgctgaagccgacggtgcccgtagggccggattgg
ctctatgaggtgaagttggatggctatcgattggcaatgcatattgagccgaagggcgtg
cgggtcatcacccgcggcggccatgactggacccaccgcttccccaccatcgccgcggca
gcaaaagagcttggcgtaacgaccgccattctcgatggcgaggccgttgtactcgatgag
cacggccgctcggattttggcgccctgcagcgttcgctcggcgggcggggcggcaagcgg
gtgtcgaccgaggcaatcctcgttgccttcgaccttctctatctcgatggacacgatctg
acaggcaccgagcttgacgtacgccggcacctgcttgaagacctaatgccggacggcgac
gatcagaatatccgcctctccgaggagatagagctgccggccgaagacctcctcgagcac
gcctgccatcatcatctggaaggcatcatcgccaagcaccgcgactggccctatcgcagc
ggtcgcaccggcgattggctgaaaatcaagtgcgtgcagagcgagagcttcatgatcgtc
ggctatgagcagtctgcatccgcccgcggcggcatcggcagcctattgctggccggcaga
cgaggcctcgactggatttacgttggctccgtcggaaccggattcactgccagcgacgcc
gaattcctgaaaaagacgttggaccggctgaagacgagccagccggtcgttcccctgaag
ggcaagcgtcttgtcctcgtgcagccgacgctgatcgccgagatcgagtttcgcggctgg
acggatgacggcaatctccgccatgcctcctacaaggggctgcgcgaggttcaggacaac
gccgccgtcttcgatatgagctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (18)   

Download RDF
DBGET integrated database retrieval system