KEGG   Rhizobium johnstonii: RL0131A
Entry
RL0131A           CDS       T00402                                 
Symbol
recR
Name
(GenBank) putative recombination protein
  KO
K06187  recombination protein RecR
Organism
rle  Rhizobium johnstonii
Pathway
rle03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rle00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    RL0131A (recR)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rle03400]
    RL0131A (recR)
DNA repair and recombination proteins [BR:rle03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     RL0131A (recR)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      RL0131A (recR)
SSDB
Motif
Pfam: Toprim_4 RecR_C RecR_HhH Toprim RecR_ZnF PHF5
Other DBs
NCBI-ProteinID: CAK05620
RhizoBase: RL0131A
UniProt: Q1MN32
Position
complement(162809..163414)
AA seq 201 aa
MAKRVTGPEIEKLIQLLAKVPGLGPRSARRAALHLIKKKDQLLGPLSHAMGEAYDKVKIC
SRCGNVDTVDPCIVCTDVQRDQSVIIVVEDVSDLWALERAGAMNAAYHVLGGTLSPLDGV
GPDDLNIRGLIDRVGEGGIRELIIAVNATVEGQTTAHYITDQLQGLDVKITRLAHGVPVG
GELDYLDEGTLAAALRARTVI
NT seq 606 nt   +upstreamnt  +downstreamnt
atggcaaaacgagtcaccggccccgaaatcgaaaaactcatccagcttctggcgaaggtg
ccgggcctcgggccgcgttcggcgcgccgggcggcactgcatctgatcaagaagaaggac
cagttgctcggcccgctgtcgcatgcaatgggcgaggcctatgacaaggtgaagatctgc
tcgcgctgcggcaatgtcgatacggtcgatccctgtattgtctgcaccgacgtccaacgc
gatcaatccgtcatcatcgtcgtcgaggacgtatcggatctctgggcgctggagcgggca
ggcgcgatgaacgccgcctatcacgtgctcggcggcacgctgtcgccgctcgacggggtc
ggtccagacgatctcaatattcgcggcctgatcgaccgggtcggcgaaggcggcatccgg
gaactgatcatcgcggtcaacgccaccgtcgagggacagacgacggcgcattacatcacc
gaccagctgcaggggctcgacgtgaagatcacgcggctggcgcatggcgtgcccgtcggc
ggcgagctcgactatctcgacgagggcacgcttgcggcggcacttcgagcgcggacggtg
atatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
   RHIZOBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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